| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1430 |
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| Symbol | nifH |
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| ID | 6160271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1509709 |
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| End bp | 1510590 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641664184 |
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| Product | nitrogenase reductase |
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| Protein accession | YP_001790463 |
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| Protein GI | 171058114 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
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| TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAC TTCGGCAAAT CGCCTTCTAC GGCAAAGGTG GCATCGGCAA GTCCACCACC
TCGCAGAACA CCCTGGCTGC ATTGAGCGAC CTGGGCCAGA AGATCCTCAT CGTCGGCTGT
GATCCCAAGG CCGACTCGAC CCGCCTGATC CTGCACGCCA AGGCCCAGGA CACCATCCTG
TCGCTGGCCG CCGAGGCCGG TTCGGTCGAG GACCTCGAGC TCGAGGACGT GATGAAGGTC
GGCTACAAGG ACATCCGTTG CGTCGAATCC GGTGGCCCGG AGCCGGGTGT CGGTTGCGCC
GGCCGCGGCG TGATCACCTC GATCAACTTC CTCGAGGAAA ACGGCGCCTA TGACGGCGTG
GACTACGTGT CCTACGACGT GCTCGGCGAC GTGGTGTGCG GTGGTTTTGC CATGCCCATC
CGCGAGAACA AGGCGCAGGA GATCTACATC GTGATGTCGG GCGAGATGAT GGCCATGTAC
GCGGCCAACA ACATCTCCAA GGGCATCCTG AAGTACGCCA ACTCGGGCGG CGTGCGCCTG
GGCGGCCTGG TCTGCAACGA GCGCCAGACC GACAAGGAAC TCGAGCTGGC CGACTCGCTG
GCCAAGATGC TCGGCTCCAG GCTGATCCAC TTCGTGCCGC GCGACAACAT CGTTCAACAC
GCGGAACTGC GTCGCATGAC GGTGCTCGAG TACGCGCCGG AATCCAAGCA GGCGCAGGAG
TACCGCACGC TGGCTTCGAA GATCCACAAC AACGCCGGCA ACGGCACGAT CCCCACCCCC
ATCACGATGG ATCAGCTCGA AGACCTGCTG ATGGAGCACG GGATCATGAA GGCGGTCGAC
GAAAGCCAGG TCGGCAAGTC GGCTGCCGAA CTCGTCGCCT GA
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| Protein sequence | MAALRQIAFY GKGGIGKSTT SQNTLAALSD LGQKILIVGC DPKADSTRLI LHAKAQDTIL
SLAAEAGSVE DLELEDVMKV GYKDIRCVES GGPEPGVGCA GRGVITSINF LEENGAYDGV
DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMAMY AANNISKGIL KYANSGGVRL
GGLVCNERQT DKELELADSL AKMLGSRLIH FVPRDNIVQH AELRRMTVLE YAPESKQAQE
YRTLASKIHN NAGNGTIPTP ITMDQLEDLL MEHGIMKAVD ESQVGKSAAE LVA
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