| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1388 |
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| Symbol | |
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| ID | 6160302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1472673 |
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| End bp | 1473647 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664142 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001790421 |
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| Protein GI | 171058072 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGT CGATCATCAT CGTCAACTGG AACTCCCGCG AGTTCCTGCG CAAGGCCCTG
GCGTCGATCC CCGAGAGCAC GAGCGCCCTG AGCGTCGAGA TCATCGTGAT CGACTCGGGT
TCGTTCGACG GCTGCGCCGA GATGCTGCGC CAGGAGCATC CGCAGGTGCG CTTCATCCAG
GCCGGGAAGA ACCTCGGTTT TGCCCGCGCC AACAACGCCG CCTTCGAGGT CTCGCGCGGC
GAGGTGCTGC TGTTCCTGAA CCCGGACACC GAGGTGATCG GCGCGGCCAT CGAGGCGCTC
TACTGGCAAC TGGTGAACAC CCCGGACGCG GCGATCGTCG GCCCCAAGCT GCTCAACAGC
GACGGCTCGG TGCAGGACAC CTGCGTGCGT GCGTTTCCGA CCATCCTCAA CCAGATGCTC
GATTGCGACT GGCTGCGCCG CCGGTTTCCG GGCGCGCGCC TGTGGGGCAA GCAGGCGCTG
CTGCGCCCGG GCCGGCAAGC CTGCCGCGTC GATGCCGTCT CCGGCGCCTG CCTGATGATC
AAGCGTGCGC CGTTCGAGGC CATCGGCCGC TTCAGCACCG ACTACTTCAT GTACGCCGAA
GACATGGCGC TGTGCCTGAA AGCCGCGCGG GCCGGCTTCG GCATCTGTTT CGTGCCCGCG
GCGGTGGTGG TCCACCACGG TGGCGCGAGC AGTTCGCAGG CGCGGGTGAA CACCTTCTCG
GCCGTCATGG CGGTCGAATC GCAGTGGCGC TTCTTCCGCA ACACCCGATC GCCCCGCTAC
GCCATGCTCT ACCGCGCCGC CCTGTTCGGC GCCAGCGCCT TGCGGGTCGG CGTTCTGCTG
CTGATCTGGC CGCTGCAGGC GCTGTTCGAC CGCCGCGCCG CGCGCAGCAA CGCCTGGCCC
AAATGGCTGG CCCGGCTGCG CTGGGCGGCC GGCGGCGAGC GCTGGGCCCG CAACGATCAG
GAGGCCCAGC CGTGA
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| Protein sequence | MDLSIIIVNW NSREFLRKAL ASIPESTSAL SVEIIVIDSG SFDGCAEMLR QEHPQVRFIQ
AGKNLGFARA NNAAFEVSRG EVLLFLNPDT EVIGAAIEAL YWQLVNTPDA AIVGPKLLNS
DGSVQDTCVR AFPTILNQML DCDWLRRRFP GARLWGKQAL LRPGRQACRV DAVSGACLMI
KRAPFEAIGR FSTDYFMYAE DMALCLKAAR AGFGICFVPA AVVVHHGGAS SSQARVNTFS
AVMAVESQWR FFRNTRSPRY AMLYRAALFG ASALRVGVLL LIWPLQALFD RRAARSNAWP
KWLARLRWAA GGERWARNDQ EAQP
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