| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1382 |
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| Symbol | |
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| ID | 6159837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1466327 |
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| End bp | 1467277 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664136 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001790415 |
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| Protein GI | 171058066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCGA ATCACCACGC CGGCGCCTTC TGCCCGATCG TCCTGGCCTG CGACGAGGCC
TATCTGATGC CGCTGGCCAC CACGCTGCGC TCGGTCGTCG AGAGCAACGC CGCGCACTGG
CCGATCGAAT GCCACGTGCT GGTCGACGAT GTCTCGCTGC CAGGCCGGGC GCGGGTGGAA
CGGTCGCTGC CGGCGCGGGC TGCGCAGATC CGATGGCACG CGGTCGACCT GACGGATTTC
AGCTCGTTCG AAACCCAGGC CGCCATCTCG AAGATGACCT TTGCCAGGCT GCTGATGGCC
GATCTGCTAC CGGCCGAACT CGAGCGGGTG CTCTATCTCG ACACCGACAT CCTGGTCCTG
GGCGATCTGC TGCCGCTGAT GCGGACCGAA CTCGACGGCG CCATCCTGGG CGCCGTGCGC
GATGGCCTCG ATGCCGAACT CAAGTCGACA TCACCGGCAC CGACCGGCAT GCCGGACGTG
TGCGACTACT TCAATGCCGG CGTGCTGCTG ATCGACCTGG CGCGCTGGCG CGCCGGCCGG
GTATCGGCAG CGGCCCGCGA CCATCTGGTC GCACACCCGC AGACCCCCTT CGCCGACCAG
GATGCCCTCA ACGTGGCCTG CGACGGGCAC TGGAAGCCGC TGGCTGCGCA CTGGAATTTC
CAGGGTCATC GCAGCACCGA CATCGCTGCC CTGGCGCCCT CGCAGCGGCC CGGCATCGTG
CACTTCATCA CCGCCCTCAA GCCCTGGAAG GCCGACAGCC TGAGCCTGAA TGCCCGCCTG
TACGACGGGT GGCGCAGCCG GACGCTTTTC GCGCGGCACC CGGTCATGCG ATGGACGGAT
GCGATCCGCG CGCTGGTGTC CAGAATGAAT CGCGCGCTGT CGGCCCACGA GTCGACCCGA
CGGCTGAAAC ACCAGCTCAG GCAGACCTTC TCGACACGAC AGGCCCGATA G
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| Protein sequence | MAPNHHAGAF CPIVLACDEA YLMPLATTLR SVVESNAAHW PIECHVLVDD VSLPGRARVE
RSLPARAAQI RWHAVDLTDF SSFETQAAIS KMTFARLLMA DLLPAELERV LYLDTDILVL
GDLLPLMRTE LDGAILGAVR DGLDAELKST SPAPTGMPDV CDYFNAGVLL IDLARWRAGR
VSAAARDHLV AHPQTPFADQ DALNVACDGH WKPLAAHWNF QGHRSTDIAA LAPSQRPGIV
HFITALKPWK ADSLSLNARL YDGWRSRTLF ARHPVMRWTD AIRALVSRMN RALSAHESTR
RLKHQLRQTF STRQAR
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