| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1363 |
|---|
| Symbol | |
|---|
| ID | 6159769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 1446293 |
|---|
| End bp | 1446616 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641664117 |
|---|
| Product | iron-sulfur cluster assembly accessory protein |
|---|
| Protein accession | YP_001790396 |
|---|
| Protein GI | 171058047 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0316] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCA CCGTCACCCC CAAGGCTGCG CGCCAGATCC GCAAGGCGCT CGATCAGCGC
GGCAGCGGCT ACGGCCTGCG CGTGGCTGTC AAGACCAGCG GCTGCTCGGG CTATGCCTAC
GCGCTCGAAT TTGCCGATGC ACCCGCGCCC GAAGACCTGA GCTTCGAGAG CGAAGGCGTG
TTCGTGCTGG TCGACGCCAA GAGCCTGCCG ATGGTCGACG GCACCCAGCT CGACTGGGTG
CGCGACGGCT TGAACGAAGG CTTCCAGTTC AACAACCCGA ACGCCTCGGC CACCTGCGGC
TGTGGCGAGA GTTTCACGGT CTGA
|
|---|
| Protein sequence | MTVTVTPKAA RQIRKALDQR GSGYGLRVAV KTSGCSGYAY ALEFADAPAP EDLSFESEGV
FVLVDAKSLP MVDGTQLDWV RDGLNEGFQF NNPNASATCG CGESFTV
|
|---|
| |