Gene Lcho_1355 details

Gene Information

• Locus tag: Lcho_1355
• ID: 6161330
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 1440169
• End bp: 1440843
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 641664109
• Product: NifQ family protein
• Protein accession: YP_001790388
• Protein GI: 171058039

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 47
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACACGC TGACGCGCAA GGTCATCGGT CTGCGTTTGT CGGTGTCGCC CTCGGGCGTG 
CACGGCTCGT TGCCGGTGGG CGAGCGGCTG GCTCACTGGT CGGCCCTGAT GGCGTGCGCT 
GCCGATGTCG ACGCGCCCGA GGTCCAGGCA TTGGCCGGCG TGCTGGCCAC CGCGTTCGCC 
AGCCACGGCA CGCACCAGCT GCCGCTCGCC GGCCTGGGCG CGGCCGCCAC GCGCCGCCTG 
CTGGCGCGCT GGTTCCCGGG TGCCGAGCGG GTGCTGGGGC TGGAGTGGCA GGCGCTGGTC 
CAGGCCGCGG CGCGTGTCGA GCCGCGCTAC GACGAGATCG AGGACCTGGT CGCGCTGCTG 
ACCGACAGCG CCAGCGCCGC GGCCGGTTCG CGCGACGAGG CGCTCTGGCT GGCTCATGCC 
GTGAGCCAGG CCACGCTGGC CGACAACCAC CTGTGGCAGG ACCTGCACCT GCCCTCGCGG 
CGCGAGCTGA GCGCCTTGAT GGCACGCTGG TTTCCGCAGC TCGCCGAGCG CAATCAACGC 
GACATGAAGT GGAAGAAGTT CCTCTACAAG CAGCTGTGCG ACAAGGCCGA GCTGTCGATC 
TGCCGCGCGC CCAGTTGCAG CGTGTGCAGC GACTACGCCG TCTGTTTCGG GCCCGAGGAC 
GCGGTGGCGG CCTGA 

 

Protein sequence

MNTLTRKVIG LRLSVSPSGV HGSLPVGERL AHWSALMACA ADVDAPEVQA LAGVLATAFA 
SHGTHQLPLA GLGAAATRRL LARWFPGAER VLGLEWQALV QAAARVEPRY DEIEDLVALL 
TDSASAAAGS RDEALWLAHA VSQATLADNH LWQDLHLPSR RELSALMARW FPQLAERNQR 
DMKWKKFLYK QLCDKAELSI CRAPSCSVCS DYAVCFGPED AVAA