| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1350 |
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| Symbol | |
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| ID | 6161325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1437293 |
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| End bp | 1438666 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664104 |
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| Product | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN |
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| Protein accession | YP_001790383 |
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| Protein GI | 171058034 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01285] nitrogenase molybdenum-iron cofactor biosynthesis protein NifN |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCACG TCGTCGAATC GAAGAAGTCC TGCGCGGTCA ACCCGCTCAA GATGAGCCAG
CCGCTCGGTG CTGCCTACGC CTTCATGGGG CTGGCGAGCT GCATGCCGGT GATGCACGGC
TCGCAGGGCT GCACCTCGTT CGGCCTGGTG CTGCTGGTGC GGCATTTCAA GGAGGCGATC
CCGCTGCAGA CCACCGCGAT GAACGAGACC ACCACCATCA TGGGTGGCTA CGACAACATC
GAGCGCGCCT TGCTCAACAT CCGCAGCCGC GCCAAGCCGC AGCTGATCGC GATCTGCTCG
ACGGGGCTGA CCGAAACCAA GGGCGACGAC GTCGAGGGCT ACCTGACGCT GGCGCGCAAG
AAGCACCCCG AGCTCGCCGA CACCGCGATC GTCTACGTCA GCACGCCCGA CTACGCCGGT
GCGTTTCAAG ATGGCTGGGC CAAGGCCGTG ACGACGCTGG TGTCGCAACT GCCGCACACC
GATCTGCCGC GCCTGCCGGA CCGCATCAAC GTGCTGCCGG GTTGCCACCT GACGCCGGGT
GACATCGAGG AGTTGCGCGA GCTGATCGAG GCTTTCGGGC TGAAGCCGAC TTTCGTGCCC
GATGTGTCGG GCTCGCTCGA CGGCCACATA CCCGACGACT GGCTGGGCAC CACGCTCGGC
GGCACGTCGC TGACGGACAT GCAGCAGCTC GGCGCCGCGG CCCACACGCT GGCGATCGGC
GAGCAGATGC GCCCGGCCGC CGAGGCGCTG CAGAAGCGCT GCGGCGTGCC GTACACGCTG
TTCGACCGGC TCACCGGCCT GACCGCCACC GACGCACTGA TCCGGCATCT GACCACGCTG
TCCGGCCGCC CCGTGCCCAC GCGCATCAAG CGCCAGCGCA GCCAGCTGGT CGACGCGATG
CTCGACGGCC ATTTCCACTT CGGCAACGTC AAGATCGCGC TCGGTGCCGA GCCCGATCTG
CTGTGGGCCA TCGGCAGCTT TTTGACCGAG ATGGGCGCCG GGCTGGCGGT GTGCGTGACC
ACGACCGCCT CGCCGCTGCT GGCACGTTTG CCGAGCAACG AGGTCATCGT CGGCGATCTC
GAGGATTTCG AGATGGCCGC CAAGGCCGCC GGCTGCGACC TGCTGATGAC GCACTCGCAT
GGCCGCCAGG CGGCCGAGCG GCTGGGCAAG CCGCTGTTTC GCCTGGGCAT CCCGACCTTC
GACCGCATCG GCAATTCGCA CAAGTGCTAC GTGGGCTATC GCGGCACGCG CAACTTCGTC
TACGAGGTCG GCAACGTGCT GATGGATCAC ACCCCGCGCC ACGGCCCCGA CGCCTGGCCG
CTCGGTGAAC AGGCGCTGGC GGCGGCGCGT GGCGAGGCGG CGGTCAGCGT CTGA
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| Protein sequence | MAHVVESKKS CAVNPLKMSQ PLGAAYAFMG LASCMPVMHG SQGCTSFGLV LLVRHFKEAI
PLQTTAMNET TTIMGGYDNI ERALLNIRSR AKPQLIAICS TGLTETKGDD VEGYLTLARK
KHPELADTAI VYVSTPDYAG AFQDGWAKAV TTLVSQLPHT DLPRLPDRIN VLPGCHLTPG
DIEELRELIE AFGLKPTFVP DVSGSLDGHI PDDWLGTTLG GTSLTDMQQL GAAAHTLAIG
EQMRPAAEAL QKRCGVPYTL FDRLTGLTAT DALIRHLTTL SGRPVPTRIK RQRSQLVDAM
LDGHFHFGNV KIALGAEPDL LWAIGSFLTE MGAGLAVCVT TTASPLLARL PSNEVIVGDL
EDFEMAAKAA GCDLLMTHSH GRQAAERLGK PLFRLGIPTF DRIGNSHKCY VGYRGTRNFV
YEVGNVLMDH TPRHGPDAWP LGEQALAAAR GEAAVSV
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