| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1339 |
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| Symbol | |
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| ID | 6160325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1423663 |
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| End bp | 1424364 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664093 |
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| Product | NapC/NirT cytochrome c domain-containing protein |
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| Protein accession | YP_001790372 |
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| Protein GI | 171058023 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA ACAACAAGAC TTCATCGACT GCGCAGGGCG GACTCGTCGC ACGGCTGTGG
AAATGGCTCT GGCTGCCGGG CACGCTGATG CTGATCGGCG CCTTCGGCGC GGGCATCGTG
TTCTGGGGCG GCTTCAACAC CGCGATGGAA TACACCAACC GCGAGGAGTT CTGCATCTCG
TGCCACGAGA TGAAGGAGAA CGTGTTCGTC GAATACCGCA ACACCATCCA CTACCAGAAC
CGCACCGGCG TGCGCGCCAC CTGCCCGGAT TGCCACGTGC CCAAGGAATG GGGCCCGAAG
ATCTACCGCA AGATCCAGGC GAGCAACGAG GTGCTGCACA AGATCCTGGG CAGCATCGAC
ACGCCCGAGA AGTTCAACGC CAAGCGTGCC GTGCTGGCCC AGCATGAATG GGACCGGATG
AAGCGCACCG ACAGCCGCGA GTGCCGCAAC TGCCACAACT TCACCTACAT GGACTACGCC
GAGCAGAACA GCCGCGCGGC CACCCGTCAC CAGGTGGCGT TCACCGCGGG CCAGACCTGC
ATCGACTGCC ACAAGGGCAT CGCGCACACG CTGCCCGAGG TCGAGCAGCA CATCGGTGCC
CCCAAGGAAG CGCCGGCCGA CCCGAGCACG CCAGGGGTGA TCAACCCCAA CGAAGCCGCC
GTGGCAGCGG CCTCGGCCGC GTCGGCAGCA TCCAGGCCCT GA
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| Protein sequence | MADNNKTSST AQGGLVARLW KWLWLPGTLM LIGAFGAGIV FWGGFNTAME YTNREEFCIS
CHEMKENVFV EYRNTIHYQN RTGVRATCPD CHVPKEWGPK IYRKIQASNE VLHKILGSID
TPEKFNAKRA VLAQHEWDRM KRTDSRECRN CHNFTYMDYA EQNSRAATRH QVAFTAGQTC
IDCHKGIAHT LPEVEQHIGA PKEAPADPST PGVINPNEAA VAAASAASAA SRP
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