Gene Lcho_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1307 
Symbol 
ID6161006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1392051 
End bp1392575 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID641664061 
Productcytochrome c class I 
Protein accessionYP_001790341 
Protein GI171057992 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.466199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CTCAACACAC CCACGACGAG CACGAAAGCC CGATCAAGAC CTCCAAGCAA 
CTGATCGCCG CGGTGGTCTT TGCATTCATC GTGCCGATCT TTGCCATCGT GCTGCTGGTG 
AAGTCGGTGG CGGTCGATCC GCGCAGCGGC GCCGGCGTCG ATGCACTCGG TGCCGAGGCC 
ACGGCCGCAC GCATCCAGCC GGTCGGCGCC GTGACGCTCA AGCTCGAGGG CGGCCCGCTC 
AAGAGCGGCG AAGAAGTCTT CAAGGCGCAA TGCACCGCCT GCCACACCGC CGGCCTGGCC 
GGTGCACCCA AGATCGGCGA CAACGCCGCC TGGGGCCCGC GCATCGGCAC CGGCCTCGAG 
GCCCTGCTGA CCTCCGCGCT GAAGGGCAAG GGCGCGATGG GCGCTCAAGG CGGCGGCGAT 
TTCAGCGAGC TCGAGATCGC CCGCGCCGTG GTCTACATGG CCAACGCCAG CGGTGGCAAG 
CTCGACGAGC CCAAGGCTCC TGCCGCAGCC GCCAGCGCAC CCTGA
 
Protein sequence
MSDAQHTHDE HESPIKTSKQ LIAAVVFAFI VPIFAIVLLV KSVAVDPRSG AGVDALGAEA 
TAARIQPVGA VTLKLEGGPL KSGEEVFKAQ CTACHTAGLA GAPKIGDNAA WGPRIGTGLE 
ALLTSALKGK GAMGAQGGGD FSELEIARAV VYMANASGGK LDEPKAPAAA ASAP