Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1296 |
Symbol | |
ID | 6160908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1381964 |
End bp | 1383781 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641664050 |
Product | glutathione-regulated potassium-efflux system protein KefC |
Protein accession | YP_001790330 |
Protein GI | 171057981 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00893714 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCGCCG GCAACTGGCT GCTGACCAGC CTGGTCTTCT TCGGCGCCGC GGTGCTGGTG GTGCCGCTGG CGCGCTGGCT CGGGCTGGGC GCGATCATCG GCTACCTGGT CGCCGGCATC GCGATCGGGC CGGCCGGGCT GGGCTTCATC AGCGACCCCG ACACCACCTT GCACGTCGCC GAGTTCGGCG TGGTGCTGAT GCTGTTCATG GTCGGGCTCG AGCTCGAACC GCACCGGCTC TGGGCCATGC GCCGGCCGAT CTTCGGCTGG GGCAGCGTGC AGGTGCTGGG CTGCGCGGCG GCGCTGGCCG GCGTGGCGAT GCTCGCTGGC GCGCCCTGGC GCTGGGCGGT GGTGGGCGCG CTCGGGCTGG CGCTGTCGTC GACCGCGGTG GCCTTGCAGG TGATGGGCGA GCGCAACCTG CTGCCCACCG CCAGCGGCCA GGCGGGTTTC TCGATCCTGC TGTTCCAGGA CGTCGCCGCG ATCCCGATCC TGGCGCTGCT GCCGCTGCTG GGCACCGGCC AGGCGGCGGC CGGCAATCCG TGGCTCGAAG CCGGCAAGGC GCTGGGCGTG ATCGCCGCCA TCGTGCTGGG CGGTCGATTG CTGCTGCGCC ACGGCCTGCG CTGGGTGGCG ACCAGCCGCA CGCCGGAGGT CTTCACCGCC GCCGCGCTCG GCCTGGTGGT CGGCATCGCC GCGCTGATGC AGGCGGTCGG GCTGTCGATG GCGCTGGGTG CGTTTCTCGG CGGCGTGCTG CTGGCCGAGA GCGAATACAA GCGCGAGCTC GAGACCGACG TCGAGCCCTT CAAGGGCCTG CTGCTCGGCC TGTTCTTCAT GGCAGTGGGC ATGAGCATCG ACTTCGCCGC GCTGCTGGCG CGGCCGCTGC TCGTGCTGGC GCTGCTGCTG GGCTTCCTGG CGGTCAAGGT GCTGGTGCTG TCGGCGATCG GCCGGGCGAT GGGCCTGACG CGCGCCGAGC GGCCGGTCTG GGTGCTGCTG CTGGCGCAGG GCGGCGAGTT CGCGTTCGTG GTGTTCCAGC AGGCTGCCGA CGCGGGGGTC TTCAGCAACG CGATCGGCTC GGTGCTGGTC GGCACGGTGG CGCTGTCGAT GCTGATTACG CCGCTGCTGC TGGTGGCCTT CGACCGCTGG CTGGCGCCGC GCTACGCCGC GATGTCCGAC GGTCCGCACC GCACCGAACA TGCGCTCGAC GAGCCGCAAG AGGCGCCGAT CATCGTCTGC GGTTACGGCC GCTACGGCCA GATCGTCGGC CGGCTGCTCT ACGCCAGCGG CCTGAAGGCC ACGCTGCTCG ACCACGACCC CGAGCAGGTC GAGGTGATGC GGCGCTTCGG TTTCAGCACC TGGTACGGCG ACGCCACCCG GCTCGACCTG CTGCGCAAGG CCGGCGCCGC GCAGGCACGC GTGATCGTGG TGGCGGTCGA CGACGTCGCG CAGAGCCTGA AGATCGTCGA CCTGGCTCAG GCGCACTTTC CGCAGGCCCA GTTGGTGGTG CGGGCGCGCA ACGTGCAGCA CCACTACGCG CTGCGCGAGC GCGGCGTCAC GCACATCGAA CGCGAGACCT TCGAGTCGGC GCTGGTCAGC GGCCGCAGCG TGCTCGAGGC GATGGGCCAC GAGCCGCATC ACGCCTGGCA GCTGGCGGCC CGCTTCCGGC GCTTCAACCT GGCGCTGATC GAGCGCACCT GGCCGCACCG GGCCGATCGC CAGCAGCTGA TGTCGATCGC CAAGCAGGGC AGCCAGCAGC TCGAGGAGCT GTTCGCGCAG GAGCGCGCCG AGCGCGAACA GCAGCGCCGC GGCAACTGGC AGGACTGA
|
Protein sequence | MTAGNWLLTS LVFFGAAVLV VPLARWLGLG AIIGYLVAGI AIGPAGLGFI SDPDTTLHVA EFGVVLMLFM VGLELEPHRL WAMRRPIFGW GSVQVLGCAA ALAGVAMLAG APWRWAVVGA LGLALSSTAV ALQVMGERNL LPTASGQAGF SILLFQDVAA IPILALLPLL GTGQAAAGNP WLEAGKALGV IAAIVLGGRL LLRHGLRWVA TSRTPEVFTA AALGLVVGIA ALMQAVGLSM ALGAFLGGVL LAESEYKREL ETDVEPFKGL LLGLFFMAVG MSIDFAALLA RPLLVLALLL GFLAVKVLVL SAIGRAMGLT RAERPVWVLL LAQGGEFAFV VFQQAADAGV FSNAIGSVLV GTVALSMLIT PLLLVAFDRW LAPRYAAMSD GPHRTEHALD EPQEAPIIVC GYGRYGQIVG RLLYASGLKA TLLDHDPEQV EVMRRFGFST WYGDATRLDL LRKAGAAQAR VIVVAVDDVA QSLKIVDLAQ AHFPQAQLVV RARNVQHHYA LRERGVTHIE RETFESALVS GRSVLEAMGH EPHHAWQLAA RFRRFNLALI ERTWPHRADR QQLMSIAKQG SQQLEELFAQ ERAEREQQRR GNWQD
|
| |