Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1291 |
Symbol | |
ID | 6160390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1375169 |
End bp | 1375927 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641664045 |
Product | hypothetical protein |
Protein accession | YP_001790325 |
Protein GI | 171057976 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0000742874 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGCAGC TGATCACCGA CCCGTGGTTC TACGCGGTCG CGTTGCCGTC GGTGCTGCTG CTGGGGCTGT CGAAGTCGGG TTTTGCCTCC GGGCTGGGTT CGCTGGCCAC GCCGATGCTG GCGCTGGCGC TGCCGGTGCC GCAGGCCGCG GCCATCATGC TGCCGCTGCT GGCGGTGGCC GACGTGATGG CCTTGTGGAC GCTGCGCCGC CATGCCGATC GTGCCGTGCT GTGGATGCTG CTGCCGGCCG GGCTGGTCGG CATCGTGATC GGCTGGCTCA GTTTCGGCCT GCTGCCCGGT CACATCGTGG CCGGCATCGT CGGCGTGGTG ACGCTGGCCT TCCTGGCCTG GCAGCTGATC TGGCCGCCAC GCGCCGACGC GCCGCTGCCG GGCCACCGCC AGACCGGCGC GCTGGCGCTG ATGGCCGGCT ACACCAGCTT CGTCGCCCAC GGCGGCGGCC CGCCGGTGGC GATGGCGCTG CTGCCGCGGC GCATGGAGCC GCTGGCCTAC GCCGGCACCT CGGCGGTGTT CTTCGCCAGC ATCAACGCTG CCAAGTGGCT GCCTTATGCG GCGCTCGGCC TGCTCGACGG CCGCAACCTC TCGACCTCGG TGCTGCTGAT GCCGCTGGCC GCCGGCGGCG TGCTGCTGGG CGTGTGGGCG GCCAAGCGCA TCTCGTCGCG CTGGTTCTAC CGGCTGGTGC AGGTGGGCAT GCTGCTGACC GGCCTGAAGC TGCTGGCCGA CGCGTTCTGG CCTGCGTGA
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Protein sequence | MSQLITDPWF YAVALPSVLL LGLSKSGFAS GLGSLATPML ALALPVPQAA AIMLPLLAVA DVMALWTLRR HADRAVLWML LPAGLVGIVI GWLSFGLLPG HIVAGIVGVV TLAFLAWQLI WPPRADAPLP GHRQTGALAL MAGYTSFVAH GGGPPVAMAL LPRRMEPLAY AGTSAVFFAS INAAKWLPYA ALGLLDGRNL STSVLLMPLA AGGVLLGVWA AKRISSRWFY RLVQVGMLLT GLKLLADAFW PA
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