| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1284 |
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| Symbol | |
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| ID | 6162175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1369548 |
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| End bp | 1370243 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641664038 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790318 |
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| Protein GI | 171057969 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000136369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACAGGG CGACCACGGA CGACCACACG GCCGAGCTGC TGCACATCCG CGGCCTCGCC
AAGGCCTACG GCCGCACGCC GGTGTTCCAC GCCGTCGAGC TGCGCATGCG CCGCGGCGAG
GTGGTGGCGC TGCTCGGTGA ATCGGGTGTC GGCAAATCGA GCCTGCTGAA CTGCATCGCC
GGGCTGGACC GGCCCGATGC CGGCTCGGTG CGCATCCTCG GCCAGGCGAT CGACGCGCTC
GCCGAGCCGC AGGCCGCGGC GCTGCGGCGC GAGCAGCTGG GCTTCGTGTT CCAGGCCTTC
CACGTGCTGC CGCACCTGAG CGTGCGCCAC AACGTGGCGC TGCCGTTGCT GCTGCAGGGC
CTGCGCGACC CGGCCGCGAT CCACGCCCGG GTCGACGCAA TGCTGGCCGA GGTCGGCCTG
GCCGGGCTGG CCGAGCGGCG CCCGCGCGAG CTGTCGGGCG GCCAGCTGCA GCGGGTGGCG
ATCGCGCGCG CGCTGGTGCA CCGGCCGGCG CTGATCCTGG CCGACGAGCC CACCGGCAAC
CTCGATCCGG ACACCGCCGC GCAGGTGCTC GACCTGCTGT GCGCCCAGGC GCGCGACAGC
GGCGCCGGCT GCCTGATCGT GACCCACTCG GCCGCGGCGG CGGCGCGCGC CGACCGGGTG
CTGCGGCTGC GCGCCGACGG CGTCGCGTCT GTCTGA
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| Protein sequence | MNRATTDDHT AELLHIRGLA KAYGRTPVFH AVELRMRRGE VVALLGESGV GKSSLLNCIA
GLDRPDAGSV RILGQAIDAL AEPQAAALRR EQLGFVFQAF HVLPHLSVRH NVALPLLLQG
LRDPAAIHAR VDAMLAEVGL AGLAERRPRE LSGGQLQRVA IARALVHRPA LILADEPTGN
LDPDTAAQVL DLLCAQARDS GAGCLIVTHS AAAAARADRV LRLRADGVAS V
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