| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1283 |
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| Symbol | |
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| ID | 6162174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1368677 |
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| End bp | 1369438 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664037 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001790317 |
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| Protein GI | 171057968 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0426] Uncharacterized flavoproteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000047241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCCGTTG AACTGTTCCA TCAAGGCGGC AACCTGCGCC TGATGTTTTC CGACCTGCAG
CAGAGTCATC CGGAAGCGGT GCAGGCGAAC CAGTTCCTGA TCGTCAACGG CGACACCGGC
GCGATCATCG ATCCGGGCGG CAACCTGGCC TACAACGACC TGTACGTGGG CATGATGCGG
CACTTCCCGC CGCAGCACCT GTCGGCCATC CTGGCCTCGC ATGCCGACCC CGACATCATC
GCCTCGCTCG ACCGCTGGAT GACCTCGACC GCCGCGCCGG TCTACATCTC GTCGATCTGG
GAGCGCTTCA TCCCGCACTT CTGCAAGCCC GGCAAGACCG AGGGCCGTGT CATCGGCATC
CCCGACCGCG GCATGCGCAT CCGCATCGGC CGCGGCGAGC TGGTGGCGCT GCCGGCGCAT
TTCCTGCACG CCGAGGGCAA CTTCCAGTTC TGGGACGAGG CCAGCGGCAT CCTGTTCTCG
GGCGACCTGG GCGCCTCGAT CGGCGGCAAC GCGCGCGTGC CGGTGACGCA CCTGGCCGGC
CACATCGAGC GCATGGAACC CTTCCACCGC CGCTTCATGG TCAGCCAGAA GATCCTGCGC
CTGTGGGCGC AGATGGTGCG CACGCTGCCG ATCCGCATGA TCGTGCCGCA GCACGGCGCG
CCGCTGGCCG GCGCAGCCGT GCAGGAGTTC ATCGACTGGG CGCAGGACCT GAGCTGCGGC
GTCGACCTGA TGAACGCCAG CCACTACAGC GTGCCCCACT GA
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| Protein sequence | MPVELFHQGG NLRLMFSDLQ QSHPEAVQAN QFLIVNGDTG AIIDPGGNLA YNDLYVGMMR
HFPPQHLSAI LASHADPDII ASLDRWMTST AAPVYISSIW ERFIPHFCKP GKTEGRVIGI
PDRGMRIRIG RGELVALPAH FLHAEGNFQF WDEASGILFS GDLGASIGGN ARVPVTHLAG
HIERMEPFHR RFMVSQKILR LWAQMVRTLP IRMIVPQHGA PLAGAAVQEF IDWAQDLSCG
VDLMNASHYS VPH
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