Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1242 |
Symbol | |
ID | 6160746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1330446 |
End bp | 1330952 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641663996 |
Product | hypothetical protein |
Protein accession | YP_001790276 |
Protein GI | 171057927 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.1131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA ACGACACCAT GCCCAGCTTC GACACCGTGC TTGAACCCAA TCTGGTCGAG GTGAAAAACG CCATCGACCA ATCCAACAAG GAAATCGCCA CCCGCTTCGA CTTCAAGGGC AGCGACGCCC GCATCGAGCA GAAGGACAAG GAGCTGACGC TGTTCGCCGA CAACGACCTG CAGCTGGGCA ACGTCACCGA CATCCTGATC GGCAAGATGG CCAAGCGCGG CGTCGACATC CGCTTCCTCG ACCGCGAGGC CAAGCCCGAG AAGATGAGCC ACGACAAGCT CAAGCAGAAG GTGCTGGTCA AGGCCGGCAT CGAGGCCGAC GTGGCCAAGA AGATCAGCAA GGCGATCAAG GACAGCAAGA TGAAGGTGCA GGCCAGCATC CAGGGCGACA CCGTGCGCGT GACCGGCGCC AAGCGCGACG ACCTGCAGGC CGCGATGGCG CTGATCAAGA AGGAAATCAG CGACTACCCG CTGAGCTTCA ACAACTTCCG CGACTGA
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Protein sequence | MIENDTMPSF DTVLEPNLVE VKNAIDQSNK EIATRFDFKG SDARIEQKDK ELTLFADNDL QLGNVTDILI GKMAKRGVDI RFLDREAKPE KMSHDKLKQK VLVKAGIEAD VAKKISKAIK DSKMKVQASI QGDTVRVTGA KRDDLQAAMA LIKKEISDYP LSFNNFRD
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