| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1237 |
|---|
| Symbol | |
|---|
| ID | 6163961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 1325489 |
|---|
| End bp | 1326526 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641663991 |
|---|
| Product | bifunctional riboflavin kinase/FMN adenylyltransferase |
|---|
| Protein accession | YP_001790271 |
|---|
| Protein GI | 171057922 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.617637 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTCT TTCGCGGTTA CCACCATCCC GGCCTGGCCG CGGCGTGCGC GCTCACCATC
GGCAATTTCG ACGGCGTGCA CCGCGGTCAT CAGGCCATGC TGGCGCTGCT CCAGAACGAG
GCCCGGCATC GCGGGCTGCC GAGCTGCGTG CTGAGCTTCG AGCCGCATCC GCGCGATTTT
TTTGCCACTG TCAGCGGCAA GCCCGGCCTG GCGCCGGCCC GCATCGCGAC GCTGCGCGAC
AAGCTCGGCG AGCTCGAACG CTGCGGCGTC GACCAGGTGG TGCTGATGCG CTTCGACGCG
CGTTTTGCGG CGCTGTCGCC GCAGGCCTTC ATCGACGAGG TGCTGGTGCA GGGCCTGGGC
GCGCGCTACG TGCTGGTCGG CGACGACTTC TGCTTCGGCG CCAAGCGTGC CGGGGACTAC
GCGATGCTCG ACGCGGCCGG CAGTGCCGCC GGTTTCGACG TCGCCCGCAT GATGAGCTAC
GAGGTGCACG GCACGCGGGT GTCGAGCTCG GCGGTGCGCG AGGCGCTGAC CGGTGGCGAC
ATGGCGCGCG TGGCCGAGCT GCTCGGCCGG CCGTACAGCA TCAGCGGCCA TGTGGTGCAC
GGCCGCAAGC TCGGGCGCTC GCTGGGCGAA ACGACGATCG GCGCGGCCGA CGGTTTCCGG
ACCCTGAACG TGCGCTTCAC CCACGGCAAG CCCGCCGCCA ACGGCATCTA CGCGGTGCGC
GTTTCGGGCC TGACCGAGCA GCCGCTCGAA GGTGTCGCCA GCCTGGGCGT GCGGCCCACG
GTGGAAGACG CCGGCCGGGT GCTGCTCGAG ACCTTCTGCT TCGACTGGCC GGCACAACTC
GGCGCCGAAG GGGGCTACGG TAAAATTGCG CGCGTGGAAC TGCTCTGCAA ACTGCGCGAC
GAGGCCCGTT ACGACGGCCT GGATGCCCTG ACCGCCGCGA TCGGCCAGGA CATCGCCAAC
GCCCGCGCCT ATTTCGAACG CATCGCCGCG GCCGGCCACG CCGCCGAACG CCGGCAGACC
ACCCGCGATC GAATTTGA
|
|---|
| Protein sequence | MQVFRGYHHP GLAAACALTI GNFDGVHRGH QAMLALLQNE ARHRGLPSCV LSFEPHPRDF
FATVSGKPGL APARIATLRD KLGELERCGV DQVVLMRFDA RFAALSPQAF IDEVLVQGLG
ARYVLVGDDF CFGAKRAGDY AMLDAAGSAA GFDVARMMSY EVHGTRVSSS AVREALTGGD
MARVAELLGR PYSISGHVVH GRKLGRSLGE TTIGAADGFR TLNVRFTHGK PAANGIYAVR
VSGLTEQPLE GVASLGVRPT VEDAGRVLLE TFCFDWPAQL GAEGGYGKIA RVELLCKLRD
EARYDGLDAL TAAIGQDIAN ARAYFERIAA AGHAAERRQT TRDRI
|
|---|
| |