Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1132 |
Symbol | |
ID | 6163903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1212172 |
End bp | 1213479 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641663886 |
Product | hydroxypyruvate reductase |
Protein accession | YP_001790166 |
Protein GI | 171057817 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2379] Putative glycerate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.217848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCAGC CCGCCTCCTC CCAGGCCCAT CAAGCCCAGT TGCTACGCCG CCTGTTCGAC GCGGCGATCG CGTCGGCCCA GCCGGCCGTC TGCATCCCGC CGCACTTGCC CGATCCGGCC ACGCTCGGCA GCGGCCGGCT GATCGTGATC GGCGCGGGCA AGGCCTCGGC GGCGATGGCG CGCGCGGTCG AGCAGCATTG GCGCGGGCCG AAGTCGCAGC TCGGCGGGCT GGTGGTCACG CGCTACGGTT ACGCGGTGCC GTGCGAGCAC ATCGAGATCG TCGAGGCCGC CCACCCGGTG CCCGACGCCG CCGGCCTGGC CGCCGCCGAG CGCCTGCTGG CACTGGTTCA GGGCCTGACG GCCGACGACT TCGTGCTGTG CCTGATCTCG GGCGGCGGTT CGTCGCTGCT GCCGCTGCCG CTGCCGGGGC TGACGCTCGA TCACAAGCAG GCCGTCAACC GCGCGCTGCT GAAATCGGGC GCCACGATCA GCGAGATGAA CTGCGTGCGC CGCCATCTGT CGGCCATCAA GGGCGGGCGG CTGGCCGCGG CCTGCCATCC GGCTCGGGTG CTGACGCTGC TGCTGTCGGA CGTGCCGGGC GACAACCCGA TCGACATCGC CTCCGGCCCG ACGGTGCCAG ATCCGACCAC GTGTGACGAT GCGCTGGCGA TCGTGCGCCG CTACGGCATC GAGCTGCCCG ATGCCGTGCG CGAGGTGCTG GAAAGCGGCC GCGGTGAATC GCTCAAGCCG GGCGACGAGC GCCTGGCGCG CATCGAGACC CGCATGATCG CGACGCCGCA GATGGCGCTC GAAGCAGCAG CGGCGCTGGC GCGTGAAGCG GGCTACACGC CCTACATCCT GGGCGACGCG CTCGAAGGCG AGGCGCGCGA CGTCGGCAAG GTGCTCGCGG GTATCGCGCT GCAGGTGGCG CAGCGCGGCC AGCCGGTCGC CGCGCCGTGC GTGCTGCTGT CGGGCGGCGA GACGACGGTG ACGGTGCGCG GACAGGGCCG CGGCGGGCGC AACGTCGAGT GCCTGCTGTC GCTGGGCATC ACGCTGGCCA GCCACCCGCG CATCCACGCG CTGGCGGGCG ACACCGACGG CGTCGACGGC CAGGAGGAGA TCGCCGGTGC GATCTTCACG CCACACACGC TGACCCGTGC CTGGGCGATG GGCGTCAAGC CGCTCGATCG CCTGGCTGAA AACGATGGCC ACGGCTTCTT CGAGGCGCTG GGCGACGCGG TGGTGACCGG GCCGACGCTG ACCAACGTCA ACGACTTCCG CGCCATCCTG ATCGACGCGC AGGGCTGA
|
Protein sequence | MPQPASSQAH QAQLLRRLFD AAIASAQPAV CIPPHLPDPA TLGSGRLIVI GAGKASAAMA RAVEQHWRGP KSQLGGLVVT RYGYAVPCEH IEIVEAAHPV PDAAGLAAAE RLLALVQGLT ADDFVLCLIS GGGSSLLPLP LPGLTLDHKQ AVNRALLKSG ATISEMNCVR RHLSAIKGGR LAAACHPARV LTLLLSDVPG DNPIDIASGP TVPDPTTCDD ALAIVRRYGI ELPDAVREVL ESGRGESLKP GDERLARIET RMIATPQMAL EAAAALAREA GYTPYILGDA LEGEARDVGK VLAGIALQVA QRGQPVAAPC VLLSGGETTV TVRGQGRGGR NVECLLSLGI TLASHPRIHA LAGDTDGVDG QEEIAGAIFT PHTLTRAWAM GVKPLDRLAE NDGHGFFEAL GDAVVTGPTL TNVNDFRAIL IDAQG
|
| |