| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1101 |
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| Symbol | |
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| ID | 6160594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1174570 |
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| End bp | 1175349 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663855 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001790135 |
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| Protein GI | 171057786 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.178895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGA CCCGCCGCGC CACCCACCCG CCCGCCGCCG CCCTCGCGGA CGGCGGCAGC
GCGGTCGGCC ACAGCATCAC CGACCGCATC GTCGAATCGA TCACCACCGC CATCGTCGAG
CGCCGGCTGA TGCCCGGCAC CAAGCTCGCC GAGCAGCAGA TCGCCGACAT CTTCCAGGTC
TCGCGCACGC TGGTGCGCCA GGCGCTCAAC CAGCTGAGCC GCGACCACCT CGTCACGCTC
GAACCGGCGC GCGGCGCGCA CGTGGCGCAG CCCAGCGTCG AGGAAGCGCA GCAGGTTTTC
GCGGTGCGCA GCATGCTCGA GACCTCGATG GTGCGCCAGC TCTGCGCCGT CATCACCGAT
GCCCAGGTGG CCGACCTGCG CGAGCACCTG CGCAATGAAT CGGCCGCCGT GGTGCGCCCC
GACGTGACCG GCCGCACGCG CCTGCTGGCC GATTTCCACG TGCTGCTGGC GCGCATGCTC
GGCAACGAGG TGCTGGCGCA ACTGCTGGCC GACCTGCTGT CGCGCTCGTC GCTGATCTCG
CTGATGTACC AGAGCGCGCA CTCGGCCGAA CACTCGCAGA GCGAACACGT CGAGATCGTC
GATGCGCTCG AGCGCCGCGA CGCCCGTGCG GCGGTGCGGC TGATGGAGCA GCACCTCGGC
AACGTCGAAC GCAACCTGCG TCTGAACCCC CGCGTGCCCG ATCTGGCCGG CGCCCTGCTG
CCTGCCGGCG CGGCGCCTTT GTCCAACGCC AACACGGCCA AACGCAAGAA AAGCGCATGA
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| Protein sequence | MPSTRRATHP PAAALADGGS AVGHSITDRI VESITTAIVE RRLMPGTKLA EQQIADIFQV
SRTLVRQALN QLSRDHLVTL EPARGAHVAQ PSVEEAQQVF AVRSMLETSM VRQLCAVITD
AQVADLREHL RNESAAVVRP DVTGRTRLLA DFHVLLARML GNEVLAQLLA DLLSRSSLIS
LMYQSAHSAE HSQSEHVEIV DALERRDARA AVRLMEQHLG NVERNLRLNP RVPDLAGALL
PAGAAPLSNA NTAKRKKSA
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