| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1095 |
|---|
| Symbol | |
|---|
| ID | 6160931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 1167552 |
|---|
| End bp | 1168319 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641663849 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001790129 |
|---|
| Protein GI | 171057780 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC GCCGACTCGA ACAGGCATCG CCGTGGATCC TGCTGGTCTT CACGTTGCTG
GTCTGGCAGA TGCTGTGCAC CGGATTCAAG GTCTCGGCGT TCATCTTCCC GAGCCCGGCC
GACATCGCCG CAGCGCTGGT CGAACACAGC GCGCTGGTGG CCGGCCACGC CTGGCGCACG
TTCTGGGTGA CGATGGCGGG CTTCGGTCTG TCGATCGTGG TGGGGGTGCT GCTGGGTTTC
CTGATCGGCA GTTCGCGTGT GGCCTATACC GCCGTCTACC CGCTGATGAC GGCCTTCAAC
GCCCTGCCCA AAGCCGCGTT CGTGCCGATC CTGGTGGTGT GGTTCGGCAT CGGCGCGGGG
CCGGCGATCC TGACGGCGTT CCTGATCAGC TTCTTCCCGA TCATGGTCAA CATCGCCACC
GGCCTGGCCA CGCTCGAGCC CGAACTCGAA GACGTGCTGC GGGTGCTGGG CGCCAGGCGC
TGGGATGTGC TGATGAAGGT CGGCCTGCCG CGGTCGCTGC CGTATTTCTA CGGCTCGCTG
AAAGTGGCGA TCACGCTGGC GTTTGTCGGC ACCACCGTCA GCGAGATGAC CGCCGCCAAC
GAAGGCATCG GCTATCTGCT GATCAGCGCC GGCAGCTCCA TGCAGATGGG CCTGGCGTTT
GCCGGCCTGG TGGTGGTCGG TGCGATGGCG ATGTTGATGT ACGAGTTCTT CTCGGTGGTG
GAAAAGCGCA CCACCGGCTG GGCTCACCGT GGCTCGCACA ACGGTTGA
|
|---|
| Protein sequence | MKQRRLEQAS PWILLVFTLL VWQMLCTGFK VSAFIFPSPA DIAAALVEHS ALVAGHAWRT
FWVTMAGFGL SIVVGVLLGF LIGSSRVAYT AVYPLMTAFN ALPKAAFVPI LVVWFGIGAG
PAILTAFLIS FFPIMVNIAT GLATLEPELE DVLRVLGARR WDVLMKVGLP RSLPYFYGSL
KVAITLAFVG TTVSEMTAAN EGIGYLLISA GSSMQMGLAF AGLVVVGAMA MLMYEFFSVV
EKRTTGWAHR GSHNG
|
|---|
| |