| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1051 |
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| Symbol | |
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| ID | 6163464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1120591 |
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| End bp | 1121787 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663805 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_001790085 |
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| Protein GI | 171057736 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCT TCTCTTCCAT CGAGATGGCT CCCCGCGACC CGATCCTCGG GTTGAACGAA
CAATTCGCCA CCGACCCCAA TCCGGCCAAG GTCAACCTGG GTGTGGGCGT CTATTTCGAC
GAAGACGGCA AGCTGCCGCT GCTCAAGTGC GTCGTCGCGG CCGAGCGGCT GATGTTCGAG
GCGCCCAAGG CGCGCGGCTA CCTGCCCATC GACGGCATCG CCGCCTACGA CAAGGCGGTG
CAGGGTCTCG TTTTCGGTGC TGACAGCGCG GCGGTCAGCG GCGCGCGCGT CGCCACCGTG
CAGGCCATCG GCGGCACCGG CGGCCTGAAG ATCGGCGCCG ACTTCCTCAA GCGCGTCAAC
CCGTCGGCCA AGGTGCTGAT CTCCGACCCG AGCTGGGAAA ACCACCGCGC GCTGTTCACC
AACGCCGGCT TCGAGGTCGA CAGCTACCCG TACTACGACG CCGACGCCAA GGGCATCAAC
TTCGCCGGCA TGCTGGCCGC GCTCGAGGCA GCGCCGGCCG GCACCATCGT GCTGCTGCAC
GCCTGCTGCC ACAACCCGAC CGGCTACGAC ATCACCCCGG CGCAATGGCA GCAGGTGGTC
GCCGTGATCC GGCAGCGTGA CCTGGTCGCC TTCCTCGACA TGGCCTACCA GGGCTTCGGC
GACGGCATCG CCGAAGACGG CGCGGCCGTG CAGCAGTTCC TGGCCGCCGG CATCGACTTC
TTCGTCTCGA CCTCGTTCTC CAAGAGCTTC TCGCTCTACG GCGAGCGCGT CGGCGCGCTG
TCGGTGGTGT GCGAGAGCAA GGACGAGGCC GCGCGCGTGC TGTCGCAGCT CAAGATCGTG
ATCCGCACCA ACTACTCGAA CCCGCCGATC CACGGTGCCC AGGTGGTGGC CAGCGTGCTC
GGCACGCCCG AGTTGCGCGC GATGTGGGAG TCGGAGCTGG CCGGCATGCG CGTGCGCATC
AAGGAAATGC GGGTCGCGCT GGTCGACAAG CTCAAGGCCG CCGGCGTCGA ACGCGACCTG
AGTTTCATCT CGCGCCAGAA GGGCATGTTC AGCTACTCGG GCCTGACCAA GGAGCAGATG
GTGCGCCTGC GCAACGAGTT CGGCGTCTAC GGCGTCGACT CGGGTCGCAT CTGCGTGGCC
GCGTTGAACA ACAAGAACCT CGACTACGTG GTGAGCTCGA TCGTCAAGGT GCTCTGA
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| Protein sequence | MSLFSSIEMA PRDPILGLNE QFATDPNPAK VNLGVGVYFD EDGKLPLLKC VVAAERLMFE
APKARGYLPI DGIAAYDKAV QGLVFGADSA AVSGARVATV QAIGGTGGLK IGADFLKRVN
PSAKVLISDP SWENHRALFT NAGFEVDSYP YYDADAKGIN FAGMLAALEA APAGTIVLLH
ACCHNPTGYD ITPAQWQQVV AVIRQRDLVA FLDMAYQGFG DGIAEDGAAV QQFLAAGIDF
FVSTSFSKSF SLYGERVGAL SVVCESKDEA ARVLSQLKIV IRTNYSNPPI HGAQVVASVL
GTPELRAMWE SELAGMRVRI KEMRVALVDK LKAAGVERDL SFISRQKGMF SYSGLTKEQM
VRLRNEFGVY GVDSGRICVA ALNNKNLDYV VSSIVKVL
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