| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1047 |
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| Symbol | |
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| ID | 6163460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1115934 |
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| End bp | 1117169 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663801 |
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| Product | cysteine desulfurase IscS |
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| Protein accession | YP_001790081 |
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| Protein GI | 171057732 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTTTA GCAAAATGGA TATGACACCC CACTTCCCGA TCTATATGGA CTATGGCGCA
ACCACCCCGG TGGATCCGCG CGTCGTGGAC CAGATGGTGC CCTGGTTGCG CGAGCACTTC
GGCAACCCGG CCTCGCGCAG CCACGCCTGG GGCTGGGAGG CAGAAGAGGC GGTCGAGAAG
GCGCGTGCGC AGGTCGCGGC TCTGGTCGGC GCCGACCCGC GCGAGATCGT CTGGACTTCG
GGTGCCACCG AGTCGATCAA CCTCGCGCTC AAGGGCGCGG CGCAGTTCTA CAAGAGCCGC
GGCAAGCACA TCATCACGTT CAAGACCGAG CACAAGGCCG TGCTCGACTC GGTGCGCGAA
CTCGAGCGCC AGGGCTTCGA CGCCAGTTAT CTCGACGTGC AGGAAAACGG CCTGATCGAC
CTCGATCGCT TCAAGGACGC GCTGCGCCCC GACACGATCC TGGTCTCGGT GCTGCTCGTC
AACAACGAGA TCGGCGTGAT CCAGGACATC ACCGCGATCG GCTCGATCTG CCGCGAACGC
GGCATCATCT TCCACGTCGA TGCGGCGCAG GCCACCGGCA AGGTCGACAT CGATCTGGCC
CACCTGCCGG TCGACCTGAT GAGCCTGGCC TCGCACAAGA CCTACGGCCC CAAGGGCATC
GGCGCGCTCT ACGTGCGCCG CAAGCCGCGC GTGCGGCTGG AGGCTCAGAT GCACGGTGGT
GGCCATGAGC GCGGCATGCG CTCGGGCACA CTGCCCACGC ACCAGATCGT CGGCATGGGC
GCGGCCTTCC AGATCGCACA AGCCGAGATG GGCGCCGAGC GCGAACGCAT CCGCGGTCTG
CAGCAGCGTC TGCTGGCCGG CTTGTCGGAC ATCGAGCAGG TCTTCATCAA CGGCGACCTC
GAGCGCCGCG TGCCGCACAA CGTCAACGCG TCGTTCAACT TCGTGGAAGG TGAATCGCTG
ATCATGGGCG TCAAGGGCAT CGCGGTCTCG TCCGGATCGG CCTGCACCTC GGCCAGCCTG
GAGCCCAGCT ATGTGCTGCG GGCGCTGGGC CGCAGCGACG AGCTGGCGCA TTCCAGCCTG
CGCATGACGA TCGGTCGTTT CACGACGGTC GAGGAAATCG ACTACGCGGT GTCGACGCTC
AAAGACCGCG TCGCCAAGCT GCGCGAGTTG TCGCCGCTGT GGGACATGTA CAAGGACGGT
GTCGACCTCA GCACCATCCA GTGGTCGGCA CATTGA
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| Protein sequence | MWFSKMDMTP HFPIYMDYGA TTPVDPRVVD QMVPWLREHF GNPASRSHAW GWEAEEAVEK
ARAQVAALVG ADPREIVWTS GATESINLAL KGAAQFYKSR GKHIITFKTE HKAVLDSVRE
LERQGFDASY LDVQENGLID LDRFKDALRP DTILVSVLLV NNEIGVIQDI TAIGSICRER
GIIFHVDAAQ ATGKVDIDLA HLPVDLMSLA SHKTYGPKGI GALYVRRKPR VRLEAQMHGG
GHERGMRSGT LPTHQIVGMG AAFQIAQAEM GAERERIRGL QQRLLAGLSD IEQVFINGDL
ERRVPHNVNA SFNFVEGESL IMGVKGIAVS SGSACTSASL EPSYVLRALG RSDELAHSSL
RMTIGRFTTV EEIDYAVSTL KDRVAKLREL SPLWDMYKDG VDLSTIQWSA H
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