Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1032 |
Symbol | |
ID | 6159979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1097891 |
End bp | 1098751 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663782 |
Product | hypothetical protein |
Protein accession | YP_001790068 |
Protein GI | 171057719 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGATC TGCCCCAACC CACCTTCGCG CTGGCCGAAT TGCGGATGCC GCCTCGGCGG CTGATGCCAA CGCGTCAAGC GGTTCTGCCG ATCGTCCCGG ACAGCATCCC GGCGCCGGCG CCCGTCCCCC AGGCTGCCAT GACCGCCGCA TGGGCCACCA CGCCGCAGCA TGTCGAACAG GCCCAGCGCC TGCGCCACCA GGTGTTCGTC GGAGAAATGG GCGCGCGGCT CAACAACATC CCCGGCACGC CGCCCGGCTT GGACCGAGAC ATCTTCGACG CCCACTGCGA GCACCTGCTG GTGCGCAGCA GCACCGGCGA CGTGATCGGC ACCTACCGCG TCATGACGCC GACCGCCGCG CGCCGCATGG GTGGCTGGTA CAGCGAGACC GAATTCGACT TCACGCGCCT GCGCCATCAC ACCGCGACGA TGGCCGAACT CGGCCGCTCC TGCGTTCATG CGGACCACCG CAACGGCGGC GTGATCATGA CGCTGTGGGC CGCACTGGGT GACTTCATGC GGCGCAACCA GCTCGACACC ATGGTCGGCT GCGCCAGCAT CAGCATGCGC GACGGCGGCC ATGTGGCGGC GAGCGTCTGG GAGCAACTGC GCCAGACGCA CCTGGCACCG ATCGAACACC ATGTGCAGCC GCGGCTGCCC CTGCCGGTCG ACGAACTGAA CAAGCGCCTG CAGGTCGAGA CGCCGGCCCT GATCAAGGGC TACCTGCGCT GCGGCGCCAA GGTGCTGGGC CCGCCGGCCT GGGATCCCGA CTTCAACACC GCCGACCTGC CGATGATGCT GCGCCTGTGC GACCTGCCAA GCCGCTACCA GCGCCACTTC ATGGGCGCCG CGACAGCCTG A
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Protein sequence | MRDLPQPTFA LAELRMPPRR LMPTRQAVLP IVPDSIPAPA PVPQAAMTAA WATTPQHVEQ AQRLRHQVFV GEMGARLNNI PGTPPGLDRD IFDAHCEHLL VRSSTGDVIG TYRVMTPTAA RRMGGWYSET EFDFTRLRHH TATMAELGRS CVHADHRNGG VIMTLWAALG DFMRRNQLDT MVGCASISMR DGGHVAASVW EQLRQTHLAP IEHHVQPRLP LPVDELNKRL QVETPALIKG YLRCGAKVLG PPAWDPDFNT ADLPMMLRLC DLPSRYQRHF MGAATA
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