Gene Lcho_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1025 
Symbol 
ID6159708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1094224 
End bp1094646 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content74% 
IMG OID641663775 
Productflagellar biosynthesis protein FliO 
Protein accessionYP_001790061 
Protein GI171057712 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGT CCTGGATGTC CCTGTTGTGG TTCGCGCTGA TCGTGGCGCT GATACCGGCC 
GCGCTGTGGC TGTTCAAGCG CTCGGGCATG GCCGGCGCGA TGACGCGCTC GCAGGCGCTG
GCGTTGCGCC AGGTCGGCTC GCTGGGCCTG GGGCCGCAGC AGCGCATCGT GGCGGTCGAG
GTGGGCGAGG GCGAGGCCCG CCGCTGGCTG CTGCTGGGCG TGACGCCGCA GCAGATCAAT
GCGCTGCATG TGCTCGACCA GTGGCCGGGC ACATCGGGCG AGCCGTCCGC CGGCCAGTCG
GCCAAGGGCG GCTCAGGCGG CCGCGACGGC GGATTCGGCG CCGAACTGGC GCAGCGCCTG
CGCGCGGGCC TGGGTGCGCC GGTGTCGACA CCGTCGGGCA AGCCGACGGC AGACCGGACC
TGA
 
Protein sequence
MTPSWMSLLW FALIVALIPA ALWLFKRSGM AGAMTRSQAL ALRQVGSLGL GPQQRIVAVE 
VGEGEARRWL LLGVTPQQIN ALHVLDQWPG TSGEPSAGQS AKGGSGGRDG GFGAELAQRL
RAGLGAPVST PSGKPTADRT