Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1025 |
Symbol | |
ID | 6159708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1094224 |
End bp | 1094646 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641663775 |
Product | flagellar biosynthesis protein FliO |
Protein accession | YP_001790061 |
Protein GI | 171057712 |
COG category | [N] Cell motility |
COG ID | [COG3190] Flagellar biogenesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGT CCTGGATGTC CCTGTTGTGG TTCGCGCTGA TCGTGGCGCT GATACCGGCC GCGCTGTGGC TGTTCAAGCG CTCGGGCATG GCCGGCGCGA TGACGCGCTC GCAGGCGCTG GCGTTGCGCC AGGTCGGCTC GCTGGGCCTG GGGCCGCAGC AGCGCATCGT GGCGGTCGAG GTGGGCGAGG GCGAGGCCCG CCGCTGGCTG CTGCTGGGCG TGACGCCGCA GCAGATCAAT GCGCTGCATG TGCTCGACCA GTGGCCGGGC ACATCGGGCG AGCCGTCCGC CGGCCAGTCG GCCAAGGGCG GCTCAGGCGG CCGCGACGGC GGATTCGGCG CCGAACTGGC GCAGCGCCTG CGCGCGGGCC TGGGTGCGCC GGTGTCGACA CCGTCGGGCA AGCCGACGGC AGACCGGACC TGA
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Protein sequence | MTPSWMSLLW FALIVALIPA ALWLFKRSGM AGAMTRSQAL ALRQVGSLGL GPQQRIVAVE VGEGEARRWL LLGVTPQQIN ALHVLDQWPG TSGEPSAGQS AKGGSGGRDG GFGAELAQRL RAGLGAPVST PSGKPTADRT
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