| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0967 |
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| Symbol | |
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| ID | 6161476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1033191 |
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| End bp | 1034345 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663718 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001790004 |
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| Protein GI | 171057655 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTG ACCTGCAATG GCTGCTGCTG GGCCTGCCGG TGGCGTTCGC GCTCGGCTGG
CTGGGCTCGC GCCTCGACCT GCGCCACCTC AGGCGCGAAA CCGAATCCTC GCCGCGGGCC
TATTTCAAGG GCCTGAACCT GCTGCTCAAT GAACAGCAGG ACAAGGCCAT CGATGCCTTC
ATCGAGGCGG TGCAGCAAGA CCCGGGCAGC ACCGACCTGC ACTTCGCGCT CGGCAACCTG
TTCCGTCGCC GCGGTGAATA CGAACGCGCC GTGCGGGTCC ACCAGCACCT GCTGGCACGC
GCCGATCTGC CCACCAGCGA GCGCGACCGC GCCCAGCATG CCCTCGCCCA GGATTACCTG
AAAGCCGGCC TGTTCGACCG TGCCGAGGCG GCCTACAAGG CGCTCGAAGG GACGGCCTTC
GCCACCGATG CGCGGCTGGC GTTGCTGACC TTGCACGAGT CCGCGCGGGA CTGGAAATCG
GCCATCGAAG TGGCCCGCGG GCTCGAGGCC ACCGCTGCCG GCAGCTTTGC CCAGCGCATC
GCCCACTACT GGTGCGAGCT GTGTCTGGAG GCCGATGCGG CGGGTGACGG CGCCGCCGCC
GACGCCGCGC TGACCAAGGC GCGCGAAGTG GCCCCGCAGT CGGCACGGCC GCTGATCCTG
TCGGGCCAGC GCCTGGCGCG TGCGGGCCGG CACACCGAGG CCCTGGGCCT GTGGACCGCG
CTGTCGACCG TGCACCCGGA AGCCTTTTCA GTCATCGCCG GTGACTATGC CGCCAGCGCC
CAGGTCTGCC AGCGTGCCGA CGAGGCGCTG GTCCGGCTCA AGGCCCTGCA TCTGGCGGCG
CCCTCTGCCG ACCTGCTGCT GGCTGCGCTG AGCCTGGAGT CCGACGCCGC GGCGCGGCGC
CGGATGCTGG TGCAGCACCT CAAGGAAAAT CAGAGCCTGA GCGCCGCACT CAAGCTGTTG
CAGGACCCGG CCGCCGCGCC GGACGACGAT GGCGGCGAAA GCCTGGCCAT GCAGCAGGCC
GTCGGCAAGG CCTTGCGCCC CTTGCGCCGC TACCACTGCG CGGCTTGCGG TTTCGAGGCA
CAGAACTACT TCTGGCAATG CCCCGGCTGC CACGGCTGGG ACACCTATCC GCCGCGTCGA
CTCGAGGACA TGTAG
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| Protein sequence | MDFDLQWLLL GLPVAFALGW LGSRLDLRHL RRETESSPRA YFKGLNLLLN EQQDKAIDAF
IEAVQQDPGS TDLHFALGNL FRRRGEYERA VRVHQHLLAR ADLPTSERDR AQHALAQDYL
KAGLFDRAEA AYKALEGTAF ATDARLALLT LHESARDWKS AIEVARGLEA TAAGSFAQRI
AHYWCELCLE ADAAGDGAAA DAALTKAREV APQSARPLIL SGQRLARAGR HTEALGLWTA
LSTVHPEAFS VIAGDYAASA QVCQRADEAL VRLKALHLAA PSADLLLAAL SLESDAAARR
RMLVQHLKEN QSLSAALKLL QDPAAAPDDD GGESLAMQQA VGKALRPLRR YHCAACGFEA
QNYFWQCPGC HGWDTYPPRR LEDM
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