| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0961 |
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| Symbol | |
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| ID | 6160506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1026373 |
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| End bp | 1027497 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663712 |
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| Product | chorismate mutase |
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| Protein accession | YP_001789998 |
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| Protein GI | 171057649 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGATT CCAACCCGTC TCCCGCGCCT GTCGCCGCTG TCGATCCGGC CTTGCTGGCC
TTGCGCACGC AGATCGACGC GCTCGACCGC GAGCTGCTGG CGATGCTCAA CCGCCGTGCC
GGCCTGGCCC AGCAGGTGGG CGAGATCAAG AAGCACGAGG GTTCGGTGGT GTTCCGCCCC
GAGCGCGAGG CGCAGGTGAT CGACGGGCTC AAGGCCGTCA ATCCGGGCCC GCTCAAGAGC
GAGAGCGTGG CGCCGATCTG GCGCGAGATC ATGAGCGCCT GCCGCTCGCT CGAGACGCCG
ACCCGGGTGG CCTATCTCGG CCCGGCCGGC ACGTTCAGCG AGCAGGCCGC GCTCGGTTTC
TTCGGCAGCT CGATCGTGCG GGTGCCGTGC GGCAGCATCG ACGAGGTGTT CCGCGCCACC
ACCGCCGGCG CGGCCGATTT CGGCGTGGTG CCGGTCGAGA ATTCGACCGA AGGCGTGGTG
GCGCGTTCGC TCGACCTGTT CCTGACCACG CCGCTGTTCA TCATCGGCGA GACCAGCCTG
TTCGTGCGCC ACAACCTGCT GCGCAAGCAG GACACGCTGG CCGGCATCAG CGCGGTGTGC
GCGCATCCGC AGGCGCTGGC GCAGTGCCAC GGCTGGCTGA GCTACCACCT GCCCGACGTC
GAGCGCCGGC CGGTGTCGAG CAACGCCGAA GGCGCCCGCC TGGCCGGCCT CGATCCGAGC
CTGGCGGCGA TCGCCAGCGA GCGCGCGGCC AGCGAATGGG GCCTGCACGT GGTGTCGCCG
GCGATCCAGG ACGACGCCAA CAACCGCACC CGCTTCGCCA TCGTCACGCA CCCGGAGCGC
CATCCGGCGC CGCAGGCCTC GGGCCACGAC TGCACCAGCC TGGTCGTGTC GGTCATCAAC
CGCCCGGGCG CCGTGCACGA CATCCTCGTG CCGCTGAAGG TGCACGGCGT GTCGATGAGC
CGCTTCGAGT CGCGCCCGGC GCGCTCGGAC CAGTGGGAGT ACTACTTCTA CATCGACGTG
CAGGGTCATC CCGAGACGCC GGCCGTGGCC ACCGCGCTGA AGGAACTGCG CAGCGTGTGC
GCCTACTTCA AGGTGCTGGG CACCTATCCG ATCGACGTGC ACTGA
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| Protein sequence | MSDSNPSPAP VAAVDPALLA LRTQIDALDR ELLAMLNRRA GLAQQVGEIK KHEGSVVFRP
EREAQVIDGL KAVNPGPLKS ESVAPIWREI MSACRSLETP TRVAYLGPAG TFSEQAALGF
FGSSIVRVPC GSIDEVFRAT TAGAADFGVV PVENSTEGVV ARSLDLFLTT PLFIIGETSL
FVRHNLLRKQ DTLAGISAVC AHPQALAQCH GWLSYHLPDV ERRPVSSNAE GARLAGLDPS
LAAIASERAA SEWGLHVVSP AIQDDANNRT RFAIVTHPER HPAPQASGHD CTSLVVSVIN
RPGAVHDILV PLKVHGVSMS RFESRPARSD QWEYYFYIDV QGHPETPAVA TALKELRSVC
AYFKVLGTYP IDVH
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