Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0959 |
Symbol | |
ID | 6160504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1023035 |
End bp | 1025692 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641663710 |
Product | DNA gyrase subunit A |
Protein accession | YP_001789996 |
Protein GI | 171057647 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAT TCGCCAAAGA AACCCTGCCC ATCAGCCTCG AAGAGGAGAT GCGCCGTTCC TACCTCGATT ACGCAATGAG CGTGATCGTC GGACGTGCCC TGCCTGATGC GCGTGACGGA CTGAAGCCGG TGCATCGCCG CGTGCTGTTC GCGATGCACG AGTTGAGCAA CGACTGGAAC CGGCCTTACA AGAAGTCGGC CCGCATCGTC GGCGACGTGA TCGGTAAGTA CCACCCGCAC GGCGATACCG CGGTCTACGA CACCATCGTG CGCATGGCGC AGGATTTTTC GCTGCGGCAC ATGCTGGTCG ACGGCCAGGG CAACTTCGGC TCGGTCGACG GCGACAACGC CGCGGCGATG CGCTACACCG AAATCCGCCT GGCCAAGATC GCCCACGAGA TGCTGGCCGA TCTGGACAAG GAAACCGTCG ACTTCGGTCC CAACTACGAC GGTTCCGAAA AGGAGCCGCT GGTGCTGCCC AGCCGCCTGC CCAACCTGCT GGTGAACGGC TCGACCGGCA TCGCGGTGGG CATGGCCACC AACATCCCGC CGCACAACCT CAACGAAGTC GTCGATGCCT GCCTGCATCT GATGAAGAAC CCCGAGGCGT CGATCGAGGA GCTGATGGAG ATCATCCCGG CGCCCGACTT CCCGACCGCC GGCATCATCT ACGGCATCAA CGGCGTGCGC GAGGGCTACC GCACCGGCCG CGGCAAGGTG GTGATGCGCG CCAAGGTGCA CTTCGAGGAC ATCGACCGCG GCCAGCGCCA GTCGATCATC GTCGACGAGC TGCCCTACCA GGTCAACAAG AAGACGCTCC AGGAGCGCAT GGCCGAGCTG GTGCACGAGA AGAAGATCGA AGGCATCAGC CACATCCAGG ACGAGTCCGA CAAGTCGGGC ATGCGGCTGG TGATCGAGCT CAAGCGCGGC GAGGTGCCCG AGGTCGTGCT CAACAACCTC TACAAGCAGA CCCAGCTGCA GGACACCTTC GGCATCAACA TGGTGGCGCT GATCGACGGT CAGCCCAAGC TGTGCAACCT CAAGCAGCTG CTCGAGATCT TCCTCGAGCA CCGCCGCGAG GTCGTCACCC GCCGCACCGT GTTCGAGCTG CGCAAGGCGC GCGACCGCGG CCACGTGCTC GAAGGCCTGG CGGTGGCGCT GGCCAACATC GACGAGTTCA TCGAGACCAT CAAGAACTCG CCCACGCCGC CGGTGGCCAA GCTGGCGCTG ATGAGCAAGA GCTGGGATTC GTCGGTGGTG CGCGAGATGC TCACCCGCGC CGAGGGCGAC ACGCCGGGCG GGCGCGCCGC CTTCCGCCCC GAGGGCCTGG CGCCGCAGTT CGGCATGCAG GCCGACGGGC TGTACCGCCT GTCCGACGAC CAGGCCGGCG AGATCCTGCA GATGCGCCTG CAGCGCCTGA CCGGGCTGGA GCAGGACAAG ATCGTCGGCG AGTACAAGGA CGTGATGGCG CAGATCGCCG ACCTGCTCGA CATCCTGGCC AAGCCGGCGC GGGTCACGGT CATCATCGGC GACGAACTGA CGGCCGTGCG CCAGGAGTTC GGCCAGAGCA AGATCGGCGT GCGCCGCTCG GTGGTCGAGC ACAACGTGCA GGAGCTCGGC ACCGAGGACC TGATCACGCC GACCGACATG GTGGTCACGT TGAGCCACAC CGGCTACATC AAGAGCCAGC CGCTGGCCGA ATACCGCGCG CAGAAGCGCG GCGGGCGCGG CAAGCAGGCC ACCGCGACCA AGGACGACGA CTGGGTCGAC GAGCTCTTCA TCGCCAACAC CCACGACTGG ATGCTGTGCT TCAGCAATCG CGGCCGGGTC TACTGGCTGA AGGTCTGGGA GGTGCCGCAA GGCGGGCGCA ACTCGCGCGG CAAGCCGATC GTCAACATGT TCCCGCTGCA GCCCGACGAG AAGATCAACG TCGTGCTGCC GCTGACCGGC GCCAACCGCA GCTTCCCGGC CGATCACTAC ATCTTCATGT GCACCGCGCG CGGCACGGTC AAGAAGACCG CGCTCGACGA CTTCAGCAAC CCGCGCAAGG CCGGCATCAT CGCGGTCGAC CTCGACGAAG GCGACTTCCT GATCGGCGCG GCGCTGACCG ACGGCCAGCA TGACGTGATG CTGTTCTCCG ACGGCGGCAA GGCGGTGCGT TTCGATGAAG AAGACGTGCG CCCGCTGGGC CGCCAGGCGC GTGGCGTGCG CGGCATGGCG CTCGACGAAG GCCAGAGCGT GATCGCGATG CTGGTGGCCG AGGACGAGAC GCAGAGCGTG CTGACCGCCA CCGAAAACGG CTACGGCAAG CGCACCAGCA TCCTCGAGTA CACGCGCCAC GGCCGCGGTA CCAAGGGGAT GATCGCGATC CAGCAGACCG AGCGCAACGG CAAGGTGGTG GCGGCAACGT TGGTGCGGCC CAACGACGAG ATCATGCTGA TCACCGATCG CGGTGTGCTG GTCCGCACAC GCGTTGCTGA AATTCGCGAA TTGGGACGCG CCACCCAGGG CGTGACGCTG ATCGCGCTCG ATGAAGGTGC CAAGCTGTCG GGTTTGCAGC GCATCGTCGA AAACGATGCC AACGAGTCGA TCGCCGATCC CGGCGTCGAC GCCAACCCCG AAGCCGATGC CGGAGTCCCC GGCGAGGAGA GCACCTGA
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Protein sequence | MTQFAKETLP ISLEEEMRRS YLDYAMSVIV GRALPDARDG LKPVHRRVLF AMHELSNDWN RPYKKSARIV GDVIGKYHPH GDTAVYDTIV RMAQDFSLRH MLVDGQGNFG SVDGDNAAAM RYTEIRLAKI AHEMLADLDK ETVDFGPNYD GSEKEPLVLP SRLPNLLVNG STGIAVGMAT NIPPHNLNEV VDACLHLMKN PEASIEELME IIPAPDFPTA GIIYGINGVR EGYRTGRGKV VMRAKVHFED IDRGQRQSII VDELPYQVNK KTLQERMAEL VHEKKIEGIS HIQDESDKSG MRLVIELKRG EVPEVVLNNL YKQTQLQDTF GINMVALIDG QPKLCNLKQL LEIFLEHRRE VVTRRTVFEL RKARDRGHVL EGLAVALANI DEFIETIKNS PTPPVAKLAL MSKSWDSSVV REMLTRAEGD TPGGRAAFRP EGLAPQFGMQ ADGLYRLSDD QAGEILQMRL QRLTGLEQDK IVGEYKDVMA QIADLLDILA KPARVTVIIG DELTAVRQEF GQSKIGVRRS VVEHNVQELG TEDLITPTDM VVTLSHTGYI KSQPLAEYRA QKRGGRGKQA TATKDDDWVD ELFIANTHDW MLCFSNRGRV YWLKVWEVPQ GGRNSRGKPI VNMFPLQPDE KINVVLPLTG ANRSFPADHY IFMCTARGTV KKTALDDFSN PRKAGIIAVD LDEGDFLIGA ALTDGQHDVM LFSDGGKAVR FDEEDVRPLG RQARGVRGMA LDEGQSVIAM LVAEDETQSV LTATENGYGK RTSILEYTRH GRGTKGMIAI QQTERNGKVV AATLVRPNDE IMLITDRGVL VRTRVAEIRE LGRATQGVTL IALDEGAKLS GLQRIVENDA NESIADPGVD ANPEADAGVP GEEST
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