| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0946 |
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| Symbol | |
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| ID | 6160160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1008066 |
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| End bp | 1009643 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663697 |
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| Product | alkaline phosphatase |
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| Protein accession | YP_001789983 |
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| Protein GI | 171057634 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 114 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCT CTCGTCGCGA TGCGGTCCGC CGCCTATCGG GCACCGCGCT GCTGCTCGCG
GCGGGACGCC TTCGGTCGTC CGAAAGCCCG TCGCAGATGC GGCTGCCTTC GACCCCTCCC
CGATTCGATC GCTATCCGTT CACGCTCGGG ATCGCGAGCG GCCAGCCGCG GCCCGACAGC
GTCGTGCTGT GGACCCGGCT CGCCCCCGAA CCGCATGCCG ATGGCGGCGG CATGGACCCG
CTGCCGCTCC CGCTGCGGTG GGAAATGGCG CACGACGAGG CCTTCACCCA GCCGGTGCGC
ACCGGTGAGG TGGTGGCGTT GCCGAGCCTG GCGCACAGCG TGCGGGTCCA GGTGGATCGG
CTGCCGCCGG GGCGGGTCTT CCACTACCGT TTCATCACCG GCAACGCGGT GAGCCCGATC
GGACGCACAC GCACCGCACC ACCGGCCGAC AGCCAGCCGG CGCGGCTGCG CCTGGCGCTG
GCGTCGTGCC AGCACTACGA ACAAGGCCGC TTCACGGTGC ACCGCGAGAT CGCGGCCAGC
GACCTCGATC TGGTGCTGTT CGTGGGCGAC TATGTCTACG ACTCCAGCAA CCCGAGCTTT
CTGCGCAGGC CGCATGAAGG GCCTGCGCCT GAAACGCTGG ACCAGTTTCG GGCCCGCCAC
GCCACCTACA AACTCGACCA CGACCTGCAG GCGGCCCATG CGGCGCACCC GTGGATCCTG
GCCTGGGACG ACCACGAGGT GCGCAACGAC TATGCCGCCG CGCTGGGTAC CGGCGAGTTG
TCGGCGGCCG AGTTCGTGAG CATCCGCGCG GCGGCCTACC AGGCCTACTT CGAGCACCTG
CCGCTCGCGC TCGATCAGTT CCCGGGCGAA CGGGGCATGC GCATGCACGA CCGCTACACG
TGGGGCCGAC TGGCCGAGCT GTGGACGCTC GACGGCCGCC AGCACCGCAG CGTGCAAGCC
TGCAACGCGG CGGACGAATC GGGCGGGCAT CTGCGCTGGC ATTGCGACGA ACTGGCAGAC
CGGCACCGAA CGATGCTCGG CCCCGCGCAG GAAAACTGGC TGCACCGAGG GCTCGCACAC
AGCCAGCGGC GCTGGAAACT GATCGGCCAG GCCACGCAGA TGAGCGCCTC TGGGCTCGAG
ACGCTGGGCC GGCAACTGGT GCACACCGAC GGCTGGGACG GCTATGCGTC ATCGCGCGCA
CGGCTGCTGC AGCACCTGGT CGACAGCGGC GTGCAGGACG TCGTCGCACT CGGCGGCGAC
GTGCACCGGC ATGTGGCGGC CAACCTGCGT GTCAGGCCCA ACGACGAACG TTCCGCGGTG
GTGGCCAGCG AGTTCGTCAC CACCTCGCTC ACGACCCGCG GCATCCCGGA AAGCTGGATG
TCGCTGATAC GAAGCAGCAA CCCGGACATC CTGCACGGGC GCAGTGACGA GAGGGGTTAT
GCCCTGATCG AGCTTGGAAA CCAATCGCTA CACTTGACTG CGAGAGCCAC GGGGTTTCCG
GTTACAGAAT CATCGCTTCT GCATACGCAA GCCAGTTACA GCGTTGAATC AGGTCGAGCC
GGTCCTCGAC CCGCGTGA
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| Protein sequence | MLISRRDAVR RLSGTALLLA AGRLRSSESP SQMRLPSTPP RFDRYPFTLG IASGQPRPDS
VVLWTRLAPE PHADGGGMDP LPLPLRWEMA HDEAFTQPVR TGEVVALPSL AHSVRVQVDR
LPPGRVFHYR FITGNAVSPI GRTRTAPPAD SQPARLRLAL ASCQHYEQGR FTVHREIAAS
DLDLVLFVGD YVYDSSNPSF LRRPHEGPAP ETLDQFRARH ATYKLDHDLQ AAHAAHPWIL
AWDDHEVRND YAAALGTGEL SAAEFVSIRA AAYQAYFEHL PLALDQFPGE RGMRMHDRYT
WGRLAELWTL DGRQHRSVQA CNAADESGGH LRWHCDELAD RHRTMLGPAQ ENWLHRGLAH
SQRRWKLIGQ ATQMSASGLE TLGRQLVHTD GWDGYASSRA RLLQHLVDSG VQDVVALGGD
VHRHVAANLR VRPNDERSAV VASEFVTTSL TTRGIPESWM SLIRSSNPDI LHGRSDERGY
ALIELGNQSL HLTARATGFP VTESSLLHTQ ASYSVESGRA GPRPA
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