Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0895 |
Symbol | |
ID | 6162359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 959122 |
End bp | 960030 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641663645 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001789932 |
Protein GI | 171057583 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAGC CCCGATGCTC GGTGAACCAG ATTCCGCCTG CGCTGGCCAA GGGCGATGGC TGCGACACCC TCAGCGGGCT GATCCATTGT TTCTCGCACG GTTTCCCGAC TCCCTTGGCA CGTTGGCATC ACCATGACGT GCACGAGCTG CACATCATCA CCAGCACGTC CGGCCAAGCC TTCGTGGGGG ACTGGATCGG CCCATTTCAC GCCGGGCATG TCGTGCTGGT CGGCCCACGT CTGCCGCACA ACTGGGTGTC GATGGACGTG CCCGTTGGCG GTGTTGTCGA ACGCGACCTC GTCATTCAGT TCGATCAGGC TCCGCTGTTG CGTGCATCGG CCACCATCCC CGAGCTGGCT GACCTGAGCC CTCTGTTGGA ACGGGCCAGC AACGGCATCG AGTTCTTCGG CATGTCCGAT CGCGCGGTCG CGCACTGGCG CCGCACGCAG GCAAGCCAGG GACTTCGGCG CTGGGTGGCT TTCTGCGAGT TCATGGCTGA TCTGGCCACC TGTACCCATC ACCGCGTGCT GTCGAGCATG CCGATGCAGG GTGGCGATGC GGCCGATATC CTCCCCCAGC TCGAGGCGCT CATCCTGGCG CAGCCGACCA CGCTGCTACG GCCGATCTCG GTTGCGGCAT GCGCGGTCGA GCTGGGCATG AGCGCGAGCC GGTTCAGCCG TTGCTTCCGC CGTGCCACTG GCAATACCTT CACCGACTTC GTCAACCGGG TGCGGATCCA CAGGGCCGGC CAACTGCTGG CGGAGTCGGA CCGACGCATC GTGGACATCT CTGGTGAGGT CGGCTTCCAG AATGTCGCCA ATTTCAATCG ACGCTTCCTG GAGATCCAGG GCATGACGCC GAGCGAATTC CGCAGGCGTT CGCTTGATCG TGGCGTTCTG GGCCGGTGA
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Protein sequence | MPQPRCSVNQ IPPALAKGDG CDTLSGLIHC FSHGFPTPLA RWHHHDVHEL HIITSTSGQA FVGDWIGPFH AGHVVLVGPR LPHNWVSMDV PVGGVVERDL VIQFDQAPLL RASATIPELA DLSPLLERAS NGIEFFGMSD RAVAHWRRTQ ASQGLRRWVA FCEFMADLAT CTHHRVLSSM PMQGGDAADI LPQLEALILA QPTTLLRPIS VAACAVELGM SASRFSRCFR RATGNTFTDF VNRVRIHRAG QLLAESDRRI VDISGEVGFQ NVANFNRRFL EIQGMTPSEF RRRSLDRGVL GR
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