| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0846 |
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| Symbol | |
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| ID | 6160779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 907771 |
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| End bp | 909018 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663596 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001789883 |
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| Protein GI | 171057534 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACT CCCCCGCATC GACCCCAGGC GGCGCGCTCG GCGGGCTGCG CATCCTCGAC
CTCACCCGCG TGCTCGCCGG CCCCTGGTGC ACGCAGACCC TGGCCGACCT GGGCGCGGAC
GTCATCAAGA TCGAGCGCCC CGGCGCCGGC GACGACACCC GTCACTGGGG CCCGCCCTAT
GCGAAGGACG AAGCCGGCCA CGACACGCAC GAAGCCGCCT ACTTCCTCGC CGTGAACCGA
AACAAGCGCT CGGTCACACT CGACATCGCG AGCGAGGCGG GGCAAGCGCT GATCCGGCGC
CTGGTGCCGC AGTGCGACGT GCTGGTCGAG AACTACAAGG TCGGCGACAT GGCACGCTAC
GGGCTGGATT ACGACAGCCT GAGCGCCCTG CATCCGGGCC TCGTCTACTG CTCGATCACC
GGCTTCGGCC AGACAGGGCC TTACGCACCG CGCCCCGGCT ACGACTTCAT CGTGCAGGGC
ATGGGCGGCT TCATGAGCGT GACCGGCGAA CGCGACGGCG CGCCCGGTGG CGGGCCGCAG
AAGGCCGGCG TCGCGATTGC CGACCTGGCC ACCGGCGCCC ATGCCGTGAT CGCGATCCTG
GCGGCCCTGC GTCACCGCGA CCGCACCGGC GAAGGTCAAT ACCTCGACAT CGGCTTGCTC
GACGTTCAGG TGTCGCTGAT GGCGAACATG GCGAGCAACT ACCTCGCCAC CGACCGGGCG
CCCGTGCGCT GGGGCAACGC CCATCCCAAC ATCGTCCCGT ACCAGGTGTT CAAGGTGGCC
GACGGCTGGG TCATCGTGGC CTGCGGCAAC GACCACCAGT TCGGCAAGCT CGTCGACGCG
GGCCAGCGCC CCGAACTGGC CACCGACCCG CGCTTCGCCA CCAACCCTGC GCGGGTGCGC
CATCGCGAGC AACTGGTGGC ATTGCTGGAA CCCATGATGT TGACGCGCTC CCGCGATGCC
TGGATCGCGA CGCTCGAAGA GGTCGGCGTG CCGTGCGGGC CGATCAACGA TCTGGCCGAC
GTCTTCGCCG ATCCGCAGGT CATCGCGCGG CAGATGCGGC TGGACATGCC ACATCCGACC
GCCGGCCAGG TCAGCGTGCC GGCCAGCGCG CTCAAGCTCT CGGCCACGCC GGTGAGCTAT
CGACGTGCGC CGCCGCTGCT GGGCGAGCAC ACCGCCGAAG TCCTGAAGGA ACTGGCGTCG
CAGACGGACG CCGATCTCGA CGGCCTGAAG GCAAGATCCA TCATCTGA
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| Protein sequence | MSNSPASTPG GALGGLRILD LTRVLAGPWC TQTLADLGAD VIKIERPGAG DDTRHWGPPY
AKDEAGHDTH EAAYFLAVNR NKRSVTLDIA SEAGQALIRR LVPQCDVLVE NYKVGDMARY
GLDYDSLSAL HPGLVYCSIT GFGQTGPYAP RPGYDFIVQG MGGFMSVTGE RDGAPGGGPQ
KAGVAIADLA TGAHAVIAIL AALRHRDRTG EGQYLDIGLL DVQVSLMANM ASNYLATDRA
PVRWGNAHPN IVPYQVFKVA DGWVIVACGN DHQFGKLVDA GQRPELATDP RFATNPARVR
HREQLVALLE PMMLTRSRDA WIATLEEVGV PCGPINDLAD VFADPQVIAR QMRLDMPHPT
AGQVSVPASA LKLSATPVSY RRAPPLLGEH TAEVLKELAS QTDADLDGLK ARSII
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