Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0844 |
Symbol | |
ID | 6161639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 904419 |
End bp | 905621 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641663594 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_001789881 |
Protein GI | 171057532 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACG CCTACATCTG CGACGCCATC CGCACCCCCT TCGGCCGCTA CGGCGGCGCG CTGTCGTCGG TGCGCGCCGA CGACCTCGGC GCGATCCCGA TCGCCGCGCT GATGGCGCGC AACCCCGGCG TCGACTGGGC CCAGATCACC GACGTGCTCT ACGGCTGCGC GAATCAGGCC GGCGAGGACA ACCGCAACGT CGCGCGCATG TCCGCGCTGC TGGCCGGCCT GCCGCTGGAC GTGCCGGGTT CGACCATCAA TCGCCTGTGC GGCTCGGGCA TGGACGCGAT CGGCTCGGCC GCACGCGCCA TCAAGGCCGG CGAGGCGGGG CTGATGATCG CCGGCGGCGT CGAGAGCATG AGCCGCGCGC CGTTCGTGAT GCCCAAGGCC GAATCGGCCT TCAGCCGCAG CAACGCGGTC TACGACACCA CCATCGGCTG GCGCTTCGTC AACAAGCTGA TGAAGGCGCA ATACGGCGTC GACTCGATGC CCGAGACGGC CGAGAACGTG GCGACCGATT TCGGCATCGA CCGCGCCTCG CAGGACCGCA TGGCGCTGGC CTCGCAGTTG AAAGCGGTGG CGGCGCAGAA GTCCGGGTTC TTCGACGCCG AGATCTGCCC GGTGACGATT CCGCAGAAGA AGGGCGATCC GATCGTCGTC TCCAAGGACG AACACCCACG CGAGACCAGC CTCGAATCGC TCGCCAAGCT CAAGGGCGTC GTGCGCCCCG ACGGCAGCGT GACAGCCGGC AACGCCAGCG GCGTCAACGA CGGCGCCTGC GCGCTGCTGC TGGCCAGCGA CACCGCCGCG GCGTTGAACG GCCTGACGCC ACGCGCCCGC GTGGTCGGCA TGGCCACCGC CGGCGTAGCC CCGCGCATCA TGGGTTTCGG CCCGGCACCG GCCACCCGCA AGGTGCTGGC GCTGACCGGC CTGCGGCTCG ACCAGATGGA CGTCATCGAG TTGAACGAAG CCTTCGCCGC GCAAGGCCTG GCGGTGCTGC GTGACCTCGG CCTGGCCGAC GACGATGCAC GCGTCAATCC GAACGGCGGC GCGATCGCGC TCGGCCATCC GCTGGGCGCC AGCGGCGCGC GGCTGGTGAC CACGGCGATC AACCAGCTGC ACCGCATCGG CGGGCGCTAC GCGCTGTGCA CGATGTGCAT CGGCGTCGGC CAAGGCATCG CGCTGATCGT CGAGCGCGTC TGA
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Protein sequence | MTHAYICDAI RTPFGRYGGA LSSVRADDLG AIPIAALMAR NPGVDWAQIT DVLYGCANQA GEDNRNVARM SALLAGLPLD VPGSTINRLC GSGMDAIGSA ARAIKAGEAG LMIAGGVESM SRAPFVMPKA ESAFSRSNAV YDTTIGWRFV NKLMKAQYGV DSMPETAENV ATDFGIDRAS QDRMALASQL KAVAAQKSGF FDAEICPVTI PQKKGDPIVV SKDEHPRETS LESLAKLKGV VRPDGSVTAG NASGVNDGAC ALLLASDTAA ALNGLTPRAR VVGMATAGVA PRIMGFGPAP ATRKVLALTG LRLDQMDVIE LNEAFAAQGL AVLRDLGLAD DDARVNPNGG AIALGHPLGA SGARLVTTAI NQLHRIGGRY ALCTMCIGVG QGIALIVERV
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