Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0831 |
Symbol | |
ID | 6160642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 891945 |
End bp | 893147 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641663581 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_001789868 |
Protein GI | 171057519 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 101 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCACG CCTACATCTG CGACGCCATC CGCACCCCCT TCGGCCGCTA CGGCGGCGCG CTGTCATCGG TGCGAGCCGA CGACCTCGGT GCCATCCCGA TCGCCGCGCT GATGGCGCGC AACCCCGGCG TCGACTGGGC CCAGGTCACC GACGTGCTCT ACGGCTGCGC GAATCAGGCC GGCGAGGACA ACCGCAACGT CGCGCGCATG TCCGCGCTGC TGGCCGGCCT GCCGCTGGAC GTGCCGGGCT CGACCATCAA CCGCCTGTGC GGCTCGGGCA TGGATGCCGT GGGCACGGCC GCCCGCGCCA TCAAGGCCGG CGAGGCCGGC CTGATGATCG CCGGCGGCGT CGAGAGCATG AGCCGCGCAC CGTTCGTGAT GCCCAAGGCC GAGAGCGCGT TCAGCCGCAG CAACGCGGTC TACGACACCA CGATCGGCTG GCGCTTCGTC AACAAGCTCA TGAAGGCGCA ATACGGCGTC GACTCGATGC CCGAGACGGC CGAGAACGTC GCCACCGATT TCGGCATCGA CCGCGCCTCG CAGGACCGCA TGGCGCTGGC CTCGCAGCTG AAGGCGGTGG CGGCGCAGAA GTCGGGCTAC TTCGACGCCG AGATCACGCC GGTGACGATC GCGCAGAAGA AGGGCGATCC GGTCGTCGTG TCGAAGGACG AACACCCGCG CGAGACCTCG ATCGAGTCGC TCGCCAAGTT GAAGGGCGTC GTGCGCCCGG ACGGCACGGT GACGGCCGGC AATGCGTCCG GCGTCAACGA CGGCGCCTGC GCGCTGCTGC TGGCCAGCGA GACCGTCGCG GCGATGAACG GCCTGACGCC ACGCGCCCGC GTGGTCGGCA TGGCCACCGC CGGTGTGGCG CCGCGCATCA TGGGCTTCGG CCCGTCGCCG GCCACGCGCC GCGTGCTGGC ACTGACCGGC CTGACGCTGG CTCAGATGGA CGTGATCGAA CTGAACGAGG CCTTCGCTGC ACAAGGCCTG GCAGTGCTGC GCGACCTCGG CCTGGCCGAT GACGATGCGC GCGTCAACCC GAACGGCGGC GCGATCGCGC TGGGCCATCC GCTGGGCGCG AGCGGCGCGC GGCTGGTGAC CACGGCGATC AATCAGCTGC ACCGCATCCA GGGCCGCTAC GCGCTGTGCA CGATGTGCAT CGGCGTCGGG CAGGGCATCG CGCTGATCAT CGAGAGGGTA TGA
|
Protein sequence | MTHAYICDAI RTPFGRYGGA LSSVRADDLG AIPIAALMAR NPGVDWAQVT DVLYGCANQA GEDNRNVARM SALLAGLPLD VPGSTINRLC GSGMDAVGTA ARAIKAGEAG LMIAGGVESM SRAPFVMPKA ESAFSRSNAV YDTTIGWRFV NKLMKAQYGV DSMPETAENV ATDFGIDRAS QDRMALASQL KAVAAQKSGY FDAEITPVTI AQKKGDPVVV SKDEHPRETS IESLAKLKGV VRPDGTVTAG NASGVNDGAC ALLLASETVA AMNGLTPRAR VVGMATAGVA PRIMGFGPSP ATRRVLALTG LTLAQMDVIE LNEAFAAQGL AVLRDLGLAD DDARVNPNGG AIALGHPLGA SGARLVTTAI NQLHRIQGRY ALCTMCIGVG QGIALIIERV
|
| |