Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0754 |
Symbol | |
ID | 6161268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 809736 |
End bp | 810701 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641663504 |
Product | thioredoxin reductase |
Protein accession | YP_001789792 |
Protein GI | 171057443 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.290853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCAA CACACCAACA CGCCCAAGTC CTGATTCTCG GTTCCGGCCC GGCCGGATAC ACCGCGGCGA TCTACGCGGC ACGCGCCAAT CTGCAGCCCA TGCTGGTCAC CGGCATGGCC CAGGGCGGCC AGCTGATGAC GACCACCGAG GTCGACAACT GGCCCGCCGA TGTCGCCGGC GTGCAGGGCC CGGAACTGAT GCAGCGCTTC CAGAAGCACG CCGAACGTTT CAACACGAAA ATGGTGTTCG ACCACATCAA CGAGGTCGAT CTCGTACAGC GGCCGTTCAG GCTCAAGGGC GACTCGGGCA CCTACAGCTG CGATGCGCTC GTGATCGCCA CCGGCGCCAG CGCCAAGTAC CTCGGCCTGC CGTCCGAGGA AGCCTTCATG GGCCGCGGCG TCAGCGGCTG CGCCACCTGC GACGGCTTTT TCTATCGCGG TGACGTGGTC TGCGTGGTCG GCGGCGGCAA CACGGCGGTC GAGGAAGCGC TCTACCTGTC GAACATCGCC AGCAAGGTGC ACCTGATCCA CCGCCGCGAC AAGTTCCGCG CCGAGGCGAT CCTGATCGAC AAGCTCAACG AGAAGGTCGC CGCCGGCAAG ATGGAACTGC ACCTGTTCCA GACCCTCGAC GAAGTGCTCG GCGACAGCAC CGGCGTGACC GGCGTGCGCC TGAAGAGCAC CACCGACGAC AGCACCACCG AACTGGCCGT CAAGGGCTGC TTCATCGCCA TCGGCCATCA GCCCAACACC GACATCTTCA AGGGCCAGCT GGAGATGAAG GACGGCTACA TCGTCACCCG CACCGGCCTG AACGGCTTCG CGACGATGAC CAGCGTGCCC GGCGTGTTCG CCGCCGGCGA CGTGCAGGAT CACGTCTACC GCCAGGCGAT CACCAGCGCC GGCACCGGCT GCATGGCCGC TCTCGACGCC CAGCGCTTCC TCGAGCAAGG TGGCGCGGCA GGCTGA
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Protein sequence | MSSTHQHAQV LILGSGPAGY TAAIYAARAN LQPMLVTGMA QGGQLMTTTE VDNWPADVAG VQGPELMQRF QKHAERFNTK MVFDHINEVD LVQRPFRLKG DSGTYSCDAL VIATGASAKY LGLPSEEAFM GRGVSGCATC DGFFYRGDVV CVVGGGNTAV EEALYLSNIA SKVHLIHRRD KFRAEAILID KLNEKVAAGK MELHLFQTLD EVLGDSTGVT GVRLKSTTDD STTELAVKGC FIAIGHQPNT DIFKGQLEMK DGYIVTRTGL NGFATMTSVP GVFAAGDVQD HVYRQAITSA GTGCMAALDA QRFLEQGGAA G
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