| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0744 |
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| Symbol | |
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| ID | 6160729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 790941 |
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| End bp | 791963 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663494 |
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| Product | peptidase M23B |
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| Protein accession | YP_001789782 |
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| Protein GI | 171057433 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTT TGATCACCCA TGGCGGGCTC GCGCGTACGC GCTCTTTCCA TGTCGGCCCC
CTGCAGTTGG GCGTGATCGT GGCGACGTTC GTCCTGGCGA TGATGATGAT GTCGGGCACC
ATCTACCACT TCATCTTCCT CAAGGCCGCC CGCGAAGGCT GGCCGGTGGT CAGTCACCTG
ACGGGGCTGG TGGTGCGTGA TGAAACCGAG CAGCGTGACC GGTTCCTGCG CGAGAACCTC
GACGCGATGG CGCAGAAGGT CGGCGAAATG CAGGCCAAGG TCGTCAAGCT CGAGGCGATG
GGCGAGCGTG TTGCCGGCCT GGCGGGCATC AAGCCCGAGG AGCTGCGGGT TGTGGAGACG
CTCGGCGAGA AGCCCCTGGG GGGCGGCGAA GCCGCCACGG TCGAAGGTGG TCGTGGCGGG
CCCTATGTGC CGGTGTCGTC GCCCTCGATG GTGCAGCTCA ACTCGGTGGT CGACGCGCTC
GAGCTTCAGG CCGCGCGCAG CGGCGACGTG TTCACCCTGA CCGAATCGCG ACTGCTCGAG
CGCCGGCTCG AGATGATGAT GGTGCCCAGC GCGCCGCCGG TCCGCGGCCC GATCGGTTCG
GGCTTCGGCT TCCGCCTCGA TCCGTTCACG CGGCATGCCG CGCTGCACAC CGGTCTTGAT
TTTCCGGCCC CGCAGGGAAC GCCGATCCAC GCTGCGGCAG GTGGCGTCGT GCTCAATGCC
GAATCCCAGG GCGCTTATGG CCAGGCCGTC GAGATCGACC ACGGCAATGG CCTGGTCACC
CGTTATGCCC ACACATCGAA GTTCCATGTC CGCCCCGGTG AAGTGGTGCG GCGTGGCCAG
TTGATCGCCA ATGTCGGCAA CACCGGGCGC TCGACCGGGG CGCACCTGCA TTTCGAGGTG
CTGCTCAACG GCGTGCAGCA GAATCCGGCG CGCTTCCTGG CGCGTGGCGA GGACCTGTCC
CTGAAGGAAC AGACCGCAGA AGCGTCGCCC GAGCGCCGCT CCGGCAAGCG CAAGACCCGG
TGA
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| Protein sequence | MDILITHGGL ARTRSFHVGP LQLGVIVATF VLAMMMMSGT IYHFIFLKAA REGWPVVSHL
TGLVVRDETE QRDRFLRENL DAMAQKVGEM QAKVVKLEAM GERVAGLAGI KPEELRVVET
LGEKPLGGGE AATVEGGRGG PYVPVSSPSM VQLNSVVDAL ELQAARSGDV FTLTESRLLE
RRLEMMMVPS APPVRGPIGS GFGFRLDPFT RHAALHTGLD FPAPQGTPIH AAAGGVVLNA
ESQGAYGQAV EIDHGNGLVT RYAHTSKFHV RPGEVVRRGQ LIANVGNTGR STGAHLHFEV
LLNGVQQNPA RFLARGEDLS LKEQTAEASP ERRSGKRKTR
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