| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0741 |
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| Symbol | |
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| ID | 6160726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 787852 |
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| End bp | 789108 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663491 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001789779 |
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| Protein GI | 171057430 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCA AAGCCCTGTT CGCGCTGTGT GACGAACTCC TGCACGAAGT GCTGCGCTTC
ACCCAGCCGG CCGATGCCGT GGTGTCGGCG TTCTTCCGCC GCCAGCGCGC GCTCGGTGTG
CGCGAGCGCC ACACGCTGGC CGAGACGGTC TATGCCGTGG TGCGTGAGCG GCTGCGCTAT
CAGTACCTGG CCAAGTCCGG CACCGGCTCG CTCGAGCGCC GGCTGATCCT GCTGGCCTGG
CAGGGCAGCG ACAGCTACAT GCACGCGGTC GCCACGCCCG ACGAGCTCAA GTGGGTCGCC
ACGGTCAAGC TGCTCAGCCT GGCCAAGCAG CCCGACAACC TGCGCCACAA CCTGCCCGAA
TGGCTGGCCG AGGCACTCAA GCAGGAGCTG GGCGACCAGT TCTGGCCGCT GGCCGAGAGC
CTGATGAAGC CGGCCGGCCT CGACCTGCGC GCCAACCTGC TGAAGTCGCG CCGCGACGAG
GTTCGGGCGA CGCTGGCCGA AGAAGGCATC GCGACCGAGC CGACGCCGTT TTCGCCCTGG
GGCCTGCGCA CCACCGGCAA GCCGACGCTC AACCGCACCG AGACCTTCAC CCGCGGCGAG
GTCGAGGTGC AGGACGAGGG CAGCCAGCTG CTCGCCCTGC TGACCGAAGC GCGGCGTGGC
GAGATGGTGG TCGACTTCTG CGCCGGCGCC GGCGGCAAGA CGCTGGCGCT GGGCGCGATG
ATGCGCAACA CCGGCCGGCT GTACGCCTTC GACGTCTCGG CCCACCGGCT CGCGGCGCTC
AAGCCGCGGC TGGCGCGCAG CGGGCTGTCG AACGTCTACC CGGCCGGCAT CGCGCACGAA
CGCGACGACC GCATCAAGCG CCTGGGCGGC AAGATCGACC GGGTGCTGGT CGATGCGCCG
TGTTCGGGCC TGGGCACGCT GCGCCGCAAT CCCGATCTGA AGTGGCGTCA GAGCCCGCAG
TCGGTGGCCG AACTGGTGGC CAAGCAGACG GCCATCCTGG CCAGCGCCAG CCGCCTGCTC
AAGCCGGGCG GCCGGCTGGT CTACGCCACC TGCAGCCTGC TGAAGGCCGA GAACGAAGAG
ATCGCGGCGG CGTTCAGTGC GGCCCATCCG GATTTCGAGC CGCTCGACGC TGCCGAGGTG
CTGGCGCGCC AGAACGTGCC CGACGCCGCC ACGCTGACGA GCAACGGCTA CCTGCGCCTG
TGGCCGCACC AGCACGCCAC GGACGGCTTC TTCGCAGCCG TCTGGCAGCG TCGCTGA
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| Protein sequence | MTPKALFALC DELLHEVLRF TQPADAVVSA FFRRQRALGV RERHTLAETV YAVVRERLRY
QYLAKSGTGS LERRLILLAW QGSDSYMHAV ATPDELKWVA TVKLLSLAKQ PDNLRHNLPE
WLAEALKQEL GDQFWPLAES LMKPAGLDLR ANLLKSRRDE VRATLAEEGI ATEPTPFSPW
GLRTTGKPTL NRTETFTRGE VEVQDEGSQL LALLTEARRG EMVVDFCAGA GGKTLALGAM
MRNTGRLYAF DVSAHRLAAL KPRLARSGLS NVYPAGIAHE RDDRIKRLGG KIDRVLVDAP
CSGLGTLRRN PDLKWRQSPQ SVAELVAKQT AILASASRLL KPGGRLVYAT CSLLKAENEE
IAAAFSAAHP DFEPLDAAEV LARQNVPDAA TLTSNGYLRL WPHQHATDGF FAAVWQRR
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