| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0709 |
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| Symbol | |
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| ID | 6163542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 758111 |
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| End bp | 759427 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663461 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_001789749 |
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| Protein GI | 171057400 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.981478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCACC TGAACGAAAC GCACGCGCCC TCGTTGCGCA GCTGGATCGA CAGCGCGAAT
GCGCACGACA CGGATTTCCC GATCCAGAAC CTGCCGTTCG CGGTGTTCCG GCGTGACGGC
ACCGACGAGC CGTTCCGAGG CGGCGTGGCC ATCGGTGACC AGATCGTGGA CCTGGCAGCG
CTGGCCGCCG AGCGCCCTTT CACAGGCGAC GCCAGCGTGG CCTTGCAGGC GGCAGCCAGC
GATTCTTTGA ATGGCTTGAT GGCGCTCGGC CCGACAGCCT GGTCTGCGCT ACGCCTGGCG
CTTTCGAAGG CGCTGCGCAT GCAGTCGGCG TCCAGGGGCC TGGTGGAAGC CTGCCTGGTT
CCCCAGGCCG CGGCGGAGTT TGCCGTCCCG GCCCGGATCG GCGACTACAC GGACTTCTAC
ACCTCGGTCC ATCACGCCAC CAACATCGGC AGGCAGTTCC GACCGGACCA GCCGCTGCTG
CCCAACTACA AGTGGGTGCC GATCGGCTAT CACGGGCGGT CTTCAAGCAT CGGCGTGTCG
GGCCTGTCCT TCCCGCGGCC GATCGGCCAG ATGATGCGAC CCGGTGCGCC GTCGCCTGTG
GTCGGGCCTT GTGAGCGACT CGATTACGAG CTGGAACTGG GCATCTTCAT CGGGCCGGGA
AACGCGACGG GCCGGCCCGT GTCGATGGAT GAGGCCGAAT CGCAGGTGTT CGGGCTGTGC
CTGCTCAACG ACTGGTCGTC GCGGGACGTC CAGGGCTGGG AATACCAGCC GCTCGGCCCC
TTCCTGTCGA AGAATTTCGC CACGACCCTT TCTCCCTGGA TCGTGACGTT CGAGGCCCTC
GCGCCCTTCA GGGTGCCGTT CGTGCGGCCG GCCGGTGACC CGGATCCGCT CCCCTACCTC
GATTCCCCGG CCAACCGGGC CGAGGGCGCG CTGGACATCC GGCTGGAGGT CGACCTGCAG
TCCCGACTCA TGCGCGAGCG CGGCCTGAGT CCCCAGTGTC TCACCTCGAC GAGCTACCGT
CATGCCTACT GGACCCCCGC GCAGTTGGTG ACCCACCACA CGATGAACGG CTGCAACCTG
CGACCGGGCG ATCTGTTCGG CAGTGGCACT CTTTCAGGCC CGACGCTTCA GGAGGCCGGG
GCGCTGATCG AGCTGACGGT GGGCGGCCAG CAGCCACTGA CCCTTGCGGG CGGTGAATCC
CGAACCTACC TGGTCGATGG CGACAGCGTG ACCTTGCGCG GCTGGTGCGA GGCGCCCGGG
GCTGTGCGCA TCGGATTGGG TGCCTGCATC GGGACGGTGC TGCCCACGAC ATCATGA
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| Protein sequence | MAHLNETHAP SLRSWIDSAN AHDTDFPIQN LPFAVFRRDG TDEPFRGGVA IGDQIVDLAA
LAAERPFTGD ASVALQAAAS DSLNGLMALG PTAWSALRLA LSKALRMQSA SRGLVEACLV
PQAAAEFAVP ARIGDYTDFY TSVHHATNIG RQFRPDQPLL PNYKWVPIGY HGRSSSIGVS
GLSFPRPIGQ MMRPGAPSPV VGPCERLDYE LELGIFIGPG NATGRPVSMD EAESQVFGLC
LLNDWSSRDV QGWEYQPLGP FLSKNFATTL SPWIVTFEAL APFRVPFVRP AGDPDPLPYL
DSPANRAEGA LDIRLEVDLQ SRLMRERGLS PQCLTSTSYR HAYWTPAQLV THHTMNGCNL
RPGDLFGSGT LSGPTLQEAG ALIELTVGGQ QPLTLAGGES RTYLVDGDSV TLRGWCEAPG
AVRIGLGACI GTVLPTTS
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