| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0705 |
|---|
| Symbol | |
|---|
| ID | 6163753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 754030 |
|---|
| End bp | 754755 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641663457 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_001789745 |
|---|
| Protein GI | 171057396 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.531661 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCA CCCGCCCCCT CGGCCGCGCC GCCGACGCCC TGCGCCCGGT GCGCATCACC
CGCAGCTACA CCAAACACGC CGAGGGCTCG GTGCTGATCG AGTTCGGCGA CACCCAGGTG
CTGTGCACCG CCTCGGTCGA AGAAAAGGTG CCGCCGCACA AGAAGGGCAG CGGCGAGGGC
TGGGTCACGG CCGAATACGG CATGCTGCCG CGTGCCACCC ACACCCGCAG CGCGCGTGAA
GCCGCCAAGG GCAAGCAGAG CGGGCGCACG CAGGAGATCC AGCGCCTGAT CGGCCGCTCG
CTGCGCTGCG TGTTCGACCT CGCCGCTTTG GGCGAGCGCA GCATCCTGAT CGACTGCGAC
GTGCTGCAGG CCGACGGCGG CACGCGCACC GCGTCGATCA CCGGCGCCTT CGTGGCTGCG
CACGACGCGG TGCAGGGCCT GATCGCGCAG GGCAAGCTCA AGCGCAGCCC GATCCGCGAC
TTCGTCGCCG CGGTGTCGGT CGGCATCCTC GACGGCGTGG CGCTGCTCGA CCTCGAATAC
GTCGAGGACT CGGCCTGCGA CACCGACATG AACATCGTCA TGACCGGCGC GGGCGGCTTC
GTCGAAGTTC AAGGCACGGC CGAAGGTGTC GCCTTCAGCC GCGCCGAGAT GGACCAGCTG
CTGGCGCTCG GCAGCGCCGG CATCGCCGAG CTGGTGGCGG CGCAGAAGGC CGCGCTGGGA
GTCTGA
|
|---|
| Protein sequence | MSSTRPLGRA ADALRPVRIT RSYTKHAEGS VLIEFGDTQV LCTASVEEKV PPHKKGSGEG
WVTAEYGMLP RATHTRSARE AAKGKQSGRT QEIQRLIGRS LRCVFDLAAL GERSILIDCD
VLQADGGTRT ASITGAFVAA HDAVQGLIAQ GKLKRSPIRD FVAAVSVGIL DGVALLDLEY
VEDSACDTDM NIVMTGAGGF VEVQGTAEGV AFSRAEMDQL LALGSAGIAE LVAAQKAALG
V
|
|---|
| |