| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0692 |
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| Symbol | |
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| ID | 6160819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 742538 |
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| End bp | 743833 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663444 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001789732 |
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| Protein GI | 171057383 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.592025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA TCACCCTGCT GCGCAAAGAC CTCGACGCCG TGCTGGCGCG CCTGTCCGCC
CGCAAGAACC CGCAGCCGTT TCTCGACGCC GAGCGTTTCC GCGCGCTCGA AGCCGAGCGC
CGGACGTTGC AGAGCAGCAC CGAGGACCTG CAGGCGCGGC GCAACCAGCT GTCCAAGCAG
ATCGGCCACC TGAAGGCCAA GGGCGGCGAC GTGGCGCCGG TGATGGACGA GGTCGGTGGC
ATCGGCGACA CGCTCAAGGC CGGCGCCGAG CGGCTCGAGC AGATCCAGGG CGAACTCGGC
CTGATGCTGA TGCACGTGCC CAACCTGCCG CAGGCCGACG TGCCGGTGGG CGCGGATGAA
ACCGCCAACC TCGAGGTGCG GCGCTGGGGC AGCCCGCGCG AATTCGATTT CACGGTGCGC
GATCACGTCG ACCTCGGCGC ACCGCTGGGC CTCGATTTCG AGACCAGCGC CAAGCTCTCG
GGCGCGCGCT TCAGCTTCCT GAAGGGCCCG GCGGCGCGGC TGCACCGCGC GCTCGCCCAG
TTCATGCTCG ACGTGCAGAC GCAGGAACAC GGCTACACCG AGTGCTACAC GCCCTACATC
GTCAACCGCG AAGTGCTCGA AGGCACCGGC CAGCTGCCCA AGTTCAAGGA AGACATGTTC
TGGGTCTCGC GCGGCGGCGA CGAAACCCAG CCCGAGCAGT ACCTGATCTC GACCTCCGAG
ATCTCGCTCA CCAACAGCGT GCGCGAGCAG GTGCTGGCGG CCGACCAGCT GCCGATCAAG
CTGACCGCGC ACAGCCCATG TTTCCGCTCC GAAGCCGGCT CGGCCGGGCG CGACACCCGC
GGCCTGATCC GCCAGCACCA GTTCGACAAG GTCGAGATGG TGCAGATCAC CACGCCCGAG
CAGAGCGACG CCGCGCTCGA ATCGATGGTC GGCCACGCCG AAGCGGTGCT GCAGAAGCTC
GGCCTGCCGT ACCGCGTGCT GCTGCTGTCG ACCGGCGACA TGGGTTTCGG CTCGGCCAAG
ACCTATGACC TGGAAGTGTG GGTGCCGGCG CAAGCCACCT ACCGCGAGAT CAGCTCCTGC
AGCAACTGCG AGGCCTTCCA GGCCCGGCGC ATGCAGACGC GCTTCAAGAA CGCGCAGGGC
AAGAACGAGT TCGTGCACAC GCTCAACGGC TCCGGCCTGG CGGTGGGCCG CACGCTGGTG
GCGGTGCTCG AGAACTACCA GAACGCCGAC GGCAGCATCA CGGTGCCGGA AATTTTGCGT
CCTTATCTCG GCGGACTGCT TGAATTGCGC GCCTGA
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| Protein sequence | MIDITLLRKD LDAVLARLSA RKNPQPFLDA ERFRALEAER RTLQSSTEDL QARRNQLSKQ
IGHLKAKGGD VAPVMDEVGG IGDTLKAGAE RLEQIQGELG LMLMHVPNLP QADVPVGADE
TANLEVRRWG SPREFDFTVR DHVDLGAPLG LDFETSAKLS GARFSFLKGP AARLHRALAQ
FMLDVQTQEH GYTECYTPYI VNREVLEGTG QLPKFKEDMF WVSRGGDETQ PEQYLISTSE
ISLTNSVREQ VLAADQLPIK LTAHSPCFRS EAGSAGRDTR GLIRQHQFDK VEMVQITTPE
QSDAALESMV GHAEAVLQKL GLPYRVLLLS TGDMGFGSAK TYDLEVWVPA QATYREISSC
SNCEAFQARR MQTRFKNAQG KNEFVHTLNG SGLAVGRTLV AVLENYQNAD GSITVPEILR
PYLGGLLELR A
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