| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0689 |
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| Symbol | |
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| ID | 6164097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 739946 |
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| End bp | 740944 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663440 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001789729 |
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| Protein GI | 171057380 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAC GCCGCCACGC CCTCACGCCC GAAGCCCTGG AGATGATGGA CACCATCGCG
CGCACCGGCA GCTTCGCCGC GGCCGCGCGC GAACTGGGCA AGGTGCCGTC GGCGCTGACC
TACAGCGTGC GCCAGCTCGA GGAGGCGCTC GACGCGCTGC TGTTCGACCG CCGCTCGCGC
CAGGCCCAGC TCACGCCGGC CGGCGACGAG CTGCTGCGCG AGGGCCGCCG CCTGCTGCAG
CAGATCGACA CGGTGGCCAA CCGGGTGCAG CGTGTGGCCA ACGGCTGGGA GACCGAGCTG
GCGATCGCGG TCGACAACAT CGTGGCGCCG GCCGCGCTGT TCGACCTGAT CGACGCCTTC
TTCACGCTGC CCAGCGGCGT GGGTGACGAC ACCGTCGCGA CCGGCCAGAC CGCCTCCGGC
CACCGCGGCC CGCCGACCCG CCTGAAGCTG CTCGACGAAG TCATGGCCGG CACTTGGGAG
GCGCTCGTCA CCGGCCAGGC CGACCTGGCG ATCGGCGTGA CGCTGCCCGG TGCGGCCTTC
GAGGACATCC AGACCGCGGT GCTGGGCCCG CTGCGCATGG TGATGGCGGT GGCGCCGCAC
CACCCGCTGG CGCGCGAGGC GGCGCCGCTG TGTTCGGACA CCATCGCCCG CCACCGCATC
GTCGCCATCG CCGACAGCGC CAAGCGCCAC GATCCGATCA CCGTGGGCGT GCAGGCCGGC
CAGGACGTGC TGACCGTGCC GTCCGTGGCC GCCAAGCTCG AGGCCCAGCT GCGCGGCCTG
GGTTGTGGCC GCCTGCCCGA AAACCTGGTG CGCCGCCACG CCGAAGCCGG CCGTCTGGTG
GTGCTCGAGA CCGAAGAGCC GCCGCGCGAG ATCGAGCTGC ACTACGCCTG GCGGCGCAGC
GCGGCGCAGG GGCGGGCGCT CGGCTGGTGG TTGTCGCAGC TCGAAAGCGT CACCACGCGG
CGTGCGCTGA TGGAGCAGCA CGCCGGCCTG CTGCTCTGA
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| Protein sequence | MTPRRHALTP EALEMMDTIA RTGSFAAAAR ELGKVPSALT YSVRQLEEAL DALLFDRRSR
QAQLTPAGDE LLREGRRLLQ QIDTVANRVQ RVANGWETEL AIAVDNIVAP AALFDLIDAF
FTLPSGVGDD TVATGQTASG HRGPPTRLKL LDEVMAGTWE ALVTGQADLA IGVTLPGAAF
EDIQTAVLGP LRMVMAVAPH HPLAREAAPL CSDTIARHRI VAIADSAKRH DPITVGVQAG
QDVLTVPSVA AKLEAQLRGL GCGRLPENLV RRHAEAGRLV VLETEEPPRE IELHYAWRRS
AAQGRALGWW LSQLESVTTR RALMEQHAGL LL
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