Gene Lcho_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0676 
Symbol 
ID6160340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp730799 
End bp731287 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content71% 
IMG OID641663427 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_001789716 
Protein GI171057367 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGGC TCTACATCGG CCTGGGCGCC AATCTCGGCG ACAGCCGTGC CACGCTGGAA 
GCCGCTTGCG CAGAGCTGGC GGTGTTGCCC GATTGCCGCT GGGTGGCGCG CTCGGGCTGC 
TACCGCAGTG CACCGGTCGA CACCAGCGGG CCGGATTTTC TCAACGCCGT GGTGGCGCTC 
GACTGCCACC TCGATCGCAT CGACGGGCCG CTGCGGGTGC TGCGCGCGCT GCAGGCGATC 
GAGCTCGGCC ACGGCCGCGA GCGGCCTTTC CGCTACGCGC CGCGCACCCT CGATCTCGAC 
CTGCTGCTCT ACGGCGACGT GGTGCTCGAC AGCCCCGAGC TGACCGTGCC GCATCCGCGT 
CTGCACCTGC GGGCGTTCGT GCTGCGGCCC CTGCTCGAAC TGGCGCCTGA CCTGCTGCTG 
CCCGGCATCG GCCCGGCCCG CAACTGCCTG CCGGCCGTGC TCGATCAGGC GATCGAACGC 
CTGGCCTGA
 
Protein sequence
MHRLYIGLGA NLGDSRATLE AACAELAVLP DCRWVARSGC YRSAPVDTSG PDFLNAVVAL 
DCHLDRIDGP LRVLRALQAI ELGHGRERPF RYAPRTLDLD LLLYGDVVLD SPELTVPHPR 
LHLRAFVLRP LLELAPDLLL PGIGPARNCL PAVLDQAIER LA