Gene Lcho_0668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0668 
Symbol 
ID6163860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp722757 
End bp723788 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID641663419 
ProductCDP-6-deoxy-delta-3,4-glucoseen reductase 
Protein accessionYP_001789708 
Protein GI171057359 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA GCGTGACCGT ACAACCGGCC GGACGCAGCT TCGAGGTGAT GCGTGACGAG 
ACGATGCTGG GGGCGGCGAT CCGTCAGGGC GTCGGCCTGC CTTATGGCTG CAAGGATGGC 
GCCTGCAGTT CCTGCAAGAG TCGCCTGATC GAGGGCCGCG TGATCCACGG CGCCCACCAG 
CTCAAGGCGC TGAGCGTGGC CGAAGAGGAG GCCGGTTTCA TCCTGACCTG CTGCGCCACG 
CCGCAGACCG ATTGCGTGAT CGAGCAGCGC CAGGTCGCGG CGGCGGGCCA GTTCTCGATC 
CTGAAGATGC CGGTGCGGGT GTCATCGATC GAGCGGCCGG CGCCCGACGT GGCCTTGCTG 
CGGCTTCAGC TGCCGGCCAA TCAGGCTTTC CGGTATCACG CCGGGCAGTA CGTCGAGTTC 
ATCTTGCGCG ACGGCGTGCG GCGCAGCTAT TCGATGGCCA ATGCGCCCGA GCTGGTGCAG 
GGCAGCATCG AACTGCACAT CCGCCACATG CCGGGCGGGC GCTTCACCGA CCATGTCTTC 
GGGGCGATGA AGGAAAAGGA GATCCTGCGC ATCGAAGGGC CGTACGGCAG CTTCTTCCTG 
CGCGAGGACA GCGACAAGCC GATCGTGCTG CTGGCGTCGG GCACCGGTTT CGCGCCGATC 
AAGGCGCTGA TCGAACACAT GCGCGCACGC GGCATCGTGC GGCCGACCCG GCTCTATTGG 
GGTTGCCGCA GCCGCGCCGA CCTCTATCTG CACAACTGGG CCGAACAGGC TGCCGGCGAG 
TTGCCTTGGC TGAGCTACGA GCCGGTGCTG TCGCAGCCGC GTGCCGACGA TGGCTGGTGC 
GGTCGGACCG GACTGGTGCA TCACGCGGTG CTGGCGGATC TGCCGGACCT GCGCGGTCAT 
CAGGTCTATG CCTGCGGCGC GCCGATCATG GTCGAGTCGG CCCGTTGCGA TTTCGTGGCC 
CAGGCCGGCC TGCCCGACGA GGAGTTCTAC GCCGACGCCT TCACCAGCGA AGCCGACAAG 
CACGTCAGCT GA
 
Protein sequence
MNLSVTVQPA GRSFEVMRDE TMLGAAIRQG VGLPYGCKDG ACSSCKSRLI EGRVIHGAHQ 
LKALSVAEEE AGFILTCCAT PQTDCVIEQR QVAAAGQFSI LKMPVRVSSI ERPAPDVALL 
RLQLPANQAF RYHAGQYVEF ILRDGVRRSY SMANAPELVQ GSIELHIRHM PGGRFTDHVF 
GAMKEKEILR IEGPYGSFFL REDSDKPIVL LASGTGFAPI KALIEHMRAR GIVRPTRLYW 
GCRSRADLYL HNWAEQAAGE LPWLSYEPVL SQPRADDGWC GRTGLVHHAV LADLPDLRGH 
QVYACGAPIM VESARCDFVA QAGLPDEEFY ADAFTSEADK HVS