| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0607 |
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| Symbol | |
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| ID | 6159885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 656341 |
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| End bp | 657585 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663357 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) synthase 2 |
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| Protein accession | YP_001789647 |
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| Protein GI | 171057298 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000000170362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTCGTC GCCGTATCGT CGTGACCGGA CTTGGCATTG TTTCCCCGAT CGGGAACACG
GTTGCCGAGT CCTGGGACAA CCTGATCGCT GGCCGTTCCG GCATCGACCA CGTCACCCGC
TTTGACGCGG CCAATCTGGC CGTGCGCTTC GCTGGCGAAG TCAAAGGCTT CAATATCGAG
GATTACATCC CCGCCAAGGA AGCCCGCCAC ATGGACGCCT TCATCCACTT CGGCATTGCG
GCATCGCTGC AGGCCGTGCG GGATTCGGGG CTGCCCACCG GCGACGCGCT GACCGAGGAG
CTGGCCGAGC GCATCGGCGT GATGGTGGGC TCGGGCATCG GCGGCCTGCC GATGATCGAG
AACACCCACG ACGAGTACCG CGAGCGTGGG CCGCGGCGCA TTTCCCCGTT TTTCGTACCC
GCCTCGATCA TCAACATGAT CTCCGGACAT GTGTCGATCA AGTGCGGCTA CAAGGGTCCC
AACCTGGCGA TGGTGACGGC CTGCACCACC GGCCTGCACA GCATCGGCAT GGCGGCACGG
ATGATCGCGC ACGGCGATGC CGACGTGATG ATCGCCGGCG GCGCGGAGTC GACCATCTCG
CCGCTGGGCA TCGGCGGTTT CGCCTCGGCG AAGGCGCTTT CGACCCGCAA TGACGACCCC
AAGGCCGCAT CGCGCCCCTG GGATCGCGAT CGCGACGGCT TCGTGCTCGG CGAAGGTGCC
GGCGTGATGG TGGTCGAAGA ATACGAACAC GCCAAGAAGC GTGGCGCCAA GATCTACGCC
GAACTGACCG GTTTCGGCAT GACGGGCGAT GCGTATCACA TGACGGCACC CAACGTCGAC
GGCCCGCGCC GCTCGATGCA GCTCGCGCTG AAGGATGCCG GCGTCAACGC CTCGGACGTC
CAGTTCATCA ACGCCCACGG CACCTCGACG CCGCTGGGTG ACGCCAACGA GACCAACGCG
ATCAAGCTCG CGTTCGGTGA CCACGCCAAG AAGCTGGTGG TGAACTCGAC CAAGTCGATG
ACCGGCCATC TGCTGGGCGG CGCCGGCGGC ATCGAGTCGA TCTTCACGGT GCTGGGCCTG
TACCACCAGA TCTCGCCGCC GACGATCAAC CTGGACAACC AGGATCCGGC CTGCGACCTC
GACTACTGCG CCAACACGGC GCGTGAGATG AACATCGAGG TGGCGGTCAA GAACAACTTC
GGCTTCGGCG GCACCAACGG CACGCTGGTG TTCCGCCGCG TCTGA
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| Protein sequence | MTRRRIVVTG LGIVSPIGNT VAESWDNLIA GRSGIDHVTR FDAANLAVRF AGEVKGFNIE
DYIPAKEARH MDAFIHFGIA ASLQAVRDSG LPTGDALTEE LAERIGVMVG SGIGGLPMIE
NTHDEYRERG PRRISPFFVP ASIINMISGH VSIKCGYKGP NLAMVTACTT GLHSIGMAAR
MIAHGDADVM IAGGAESTIS PLGIGGFASA KALSTRNDDP KAASRPWDRD RDGFVLGEGA
GVMVVEEYEH AKKRGAKIYA ELTGFGMTGD AYHMTAPNVD GPRRSMQLAL KDAGVNASDV
QFINAHGTST PLGDANETNA IKLAFGDHAK KLVVNSTKSM TGHLLGGAGG IESIFTVLGL
YHQISPPTIN LDNQDPACDL DYCANTAREM NIEVAVKNNF GFGGTNGTLV FRRV
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