| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0601 |
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| Symbol | |
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| ID | 6160232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 649456 |
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| End bp | 651264 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663351 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_001789641 |
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| Protein GI | 171057292 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000190648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCACA TCCGCAATTT TTCGATCATC GCCCACATCG ACCACGGCAA GAGCACGCTG
GCCGACCGGA TCATCCAGCG GTGCGGCGGC CTCAGCGATC GCGAGATGGA GGCCCAGGTG
CTCGACTCGA TGGACATCGA ACGCGAGCGC GGCATCACGA TCAAGGCCCA GACCGCTGCG
CTGCAGTACA AGGCACGCGA CGGTCAGGTC TACAACCTGA ACCTGATCGA CACCCCCGGG
CACGTCGACT TCAGCTATGA AGTCAGCCGT TCGCTGTCGG CCTGCGAAGG CGCGCTGCTG
GTGGTGGACG CCAGCCAGGG CGTCGAGGCG CAGACGGTGG CCAACTGCTA CACCGCGCTC
GACCTCGGCG TCACGGTGGT GCCGGTGCTC AACAAGATGG ATCTGCCCAA CGCGGATCCC
GACAACGCCA AGGCCGAGAT CGAGGACGTG ATCGGCATCG ACGCCGACGA CGCGATCCCC
TGCTCGGCCA AGACCGGCAT GGGCATCGAC GAGATCCTCG AGGCCGTCAT CGCCCGCATG
CCGCCGCCCA AGGGCAACCC CGACGGCCCG CCGCGCGCGA TGATCGTCGA CAGCTGGTTC
GACAACTACG TCGGCGTCGT GATGCTGGTG CGGGTGGTCG ACGGCACGCT CGGCAAGGGC
GAGCGCATCC GCATGATGGC GACCAACTCG GTCTATCCGA TCGAGCACCT GGGCGTGTTC
ACGCCCAAGA GCGAGAACCG CGAGGCGCTC AAGGCCGGCG AGGTGGGCTT CATCATCTGC
GGCATCAAGG AGCTGCAGGC GGCCAAGGTG GGCGACACCG TCACGCTCGA GAAGAAGCTG
CCCAACAACG CCGGCCCGGC CGCCGAGGCG CTGCCGGGCT TCAAGGAAAT CCAGCCGCAG
GTCTTCGCCG GCCTGTATCC GACCGAAGCG AGCGAATACG ACCAGCTGCG TGACGCGCTC
GAGAAGCTCA AGCTCAACGA CAGTTCGCTG CGCTACGAGC CCGAGGTGTC GCAGGCGCTG
GGCTTCGGCT TCCGCTGCGG CTTCCTGGGC CTGCTGCACA TGGAGATCGT GCAGGAGCGG
CTCGAACGCG AGTTCGACCA GGACCTGATC ACCACCGCGC CGAGCGTGGT CTACGAGGTG
CAGCTCAACG GCGGCGACGT GATCGAGGTC GAGAACCCCT CGAAGATGCC CGAAGTGGGC
AAGATCGCCG AGATCCGCGA GCCCATCGTC ACCGTGCACC TGTACATGCC GCAGGACTAC
GTCGGCCCGG TCATGACGCT GGCCAACCAG AAGCGCGGCG TGCAGCTCAA CATGGCCTAC
CACGGCCGCC AGGTCATGCT GACCTACGAG ATGCCGCTGG CCGAGATCGT GCTCGACTTC
TTCGACAAGC TGAAGTCGGT GTCGCGCGGC TACGCCTCGA TGGACTACGA GTTCAAGGAA
TACCGGGCGT CGGACGTCGT CAAGGTCGAC ATCCTGATCA ACGGCGACCG GGTCGACGCG
CTGTCGATCA TCGTGCACCG CGCGCAGAGC CAGTACCGCG GCCGCGCGGT GGCGGCCAAG
ATGCGCGAGC AGATCCCGCG CCAGATGTAC GACGTGGCGA TCCAGGCGGC GATCGGCGCC
AACATCATCG CCCGCGAGAA CATCAAGGCG TTGCGCAAGA ACGTGCTGGC AAAATGCTAT
GGCGGCGACA TCAGTCGCAA GCGCAAGCTG CTCGAAAAAC AGAAGGCCGG CAAGAAACGC
ATGAAGCAGA TCGGCTCCGT CGAGGTGCCG CAGGAAGCTT TCCTCGCGAT CCTGCAGGTC
GAAGACTGA
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| Protein sequence | MDHIRNFSII AHIDHGKSTL ADRIIQRCGG LSDREMEAQV LDSMDIERER GITIKAQTAA
LQYKARDGQV YNLNLIDTPG HVDFSYEVSR SLSACEGALL VVDASQGVEA QTVANCYTAL
DLGVTVVPVL NKMDLPNADP DNAKAEIEDV IGIDADDAIP CSAKTGMGID EILEAVIARM
PPPKGNPDGP PRAMIVDSWF DNYVGVVMLV RVVDGTLGKG ERIRMMATNS VYPIEHLGVF
TPKSENREAL KAGEVGFIIC GIKELQAAKV GDTVTLEKKL PNNAGPAAEA LPGFKEIQPQ
VFAGLYPTEA SEYDQLRDAL EKLKLNDSSL RYEPEVSQAL GFGFRCGFLG LLHMEIVQER
LEREFDQDLI TTAPSVVYEV QLNGGDVIEV ENPSKMPEVG KIAEIREPIV TVHLYMPQDY
VGPVMTLANQ KRGVQLNMAY HGRQVMLTYE MPLAEIVLDF FDKLKSVSRG YASMDYEFKE
YRASDVVKVD ILINGDRVDA LSIIVHRAQS QYRGRAVAAK MREQIPRQMY DVAIQAAIGA
NIIARENIKA LRKNVLAKCY GGDISRKRKL LEKQKAGKKR MKQIGSVEVP QEAFLAILQV
ED
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