| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0600 |
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| Symbol | |
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| ID | 6160231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 648471 |
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| End bp | 649439 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641663350 |
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| Product | signal peptidase I |
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| Protein accession | YP_001789640 |
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| Protein GI | 171057291 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000224318 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAACCC TCACTGGCAT TCTGTACGCC GGCCTCGTCT TCTACGGCAT GGGCTGGTAT
CTCGGCAAGT GGAGTGGCAA TTTCTCGCTG CTGCTCTTCT GCCTGACCGT CGTGACCCTG
GCCTACTGGC TGGCCGAGCG CTTCCACTTC CTGCCGCGTC GGCTCGCCGC CGCTGAAAAC
CTGGCCCGTC AAGACACGCT GCGGCGTGCC GACCTGCAGC GCATGGGCAT CGCCAAGGTG
GATGGCGACA TCGACGAGGC GCGCCACAAG GTGCTGGCGC AACCCTGGTG GCTGGACTGG
ACCGCCGGGC TGTTCCCGGT GATCCTGATG GTCTTCGTGC TGCGCTCGTT CCTGTTCGAG
CCGTTCAAGA TCCCGTCGGG CTCGATGATC CCGACGCTCG AGATCGGCGA TCTCATCCTG
GTCAACAAGT TCCACTACGG CGTGCGCCTG CCGGTGATCA ACAAGAAGAT CATCCCGATC
AACGACCCGC AGCGCGGCGA CGTGATGGTG TTCCGCTACC CGGTCGACCC GAGCATCGAC
TTCATCAAGC GGGTGGTCGG CGTGCCCGGC GACGAGATCA GCTACATCAA CCAGAAGCTC
AGCCTGAACG GCAAGCCGGT GCCGCTGGAG CAGCTCGACG ACTACTACGA CGAAGACCGC
CGTACCTTCT CCAAGCAGTT CCGCGCCGAT CTGGGCCCGA CCACCCACCG CCTGCTGGTC
GACCCGCAGA TGCCGTCGAG CTACGCGATG CGCGGGCGCC AGTTCCCGCA GTCCGAGGCC
TGCCGCTACA CCTCCGACGG CGTCACTTGC AAAGTGCCGC CGGGTCACTA CTTCATGATG
GGTGACAACC GCGACAACTC CGAAGATTCG CGCTACTGGG GTTTCGTGCC GGATGAGAAC
ATCGTCGGAC GGGCCTTTTT CGTCTGGATG AACTTCAGCG ACCTCAAGCG CATCGGGTTT
TTCCGTTGA
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| Protein sequence | MGTLTGILYA GLVFYGMGWY LGKWSGNFSL LLFCLTVVTL AYWLAERFHF LPRRLAAAEN
LARQDTLRRA DLQRMGIAKV DGDIDEARHK VLAQPWWLDW TAGLFPVILM VFVLRSFLFE
PFKIPSGSMI PTLEIGDLIL VNKFHYGVRL PVINKKIIPI NDPQRGDVMV FRYPVDPSID
FIKRVVGVPG DEISYINQKL SLNGKPVPLE QLDDYYDEDR RTFSKQFRAD LGPTTHRLLV
DPQMPSSYAM RGRQFPQSEA CRYTSDGVTC KVPPGHYFMM GDNRDNSEDS RYWGFVPDEN
IVGRAFFVWM NFSDLKRIGF FR
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