Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0552 |
Symbol | |
ID | 6164127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 599447 |
End bp | 600529 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641663301 |
Product | serine/threonine protein kinase |
Protein accession | YP_001789592 |
Protein GI | 171057243 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA TCGCCCCGGA TGACCTGCCG CCCGCCTACC GCCTGCCCGC TCCACAGCAA GCCACCGACG AACAGCCCTA CGCGGGCCTG ACCCCCTACG CGGTGCTCGA CGCGCTCGAC GCCGCCGGCC TGCGCGGCGA CGGCCGCATC CTGCAGCTCA ACTCCTACGA GAACCGGGTC TTCCAGGTCC ACCTGGAAGA CGAGCGCGTG GTGGTCGCCA AGTTCTACCG CGCCGCGCGC TGGAGCGACG CGCAGATCCT CGAAGAACAT CAGTTCGCGC TCGAACTGGC AGCCGCCGAG GTGCCGGCCG TGCCGCCGCT GGTGCTCGCC GCCGGCCTGG GCATCGAGCC CGCGCCGAGG CTGCTGGGCA CGCCGCCCAC GCTGGCCGAC TGGCAGGGCT GGCGCTACGC AGCGAGCCCG CGCTGCGGCG GCCGAGCGCC CGAGCTGGAC GACCCGGCGG TGCTCGAATG GATCGGCCGC TTCCTGGCCC GCCTGCACCT GGTCGGGCAG GCCCGGCCGT TCGAACACCG CCTGCGGCTC GACGGCAGCC GCATCGCCCG CGCCGCGGTC GCCTGGCTGT GCGATCAGGA CCTGCTACCA CCCGATGCGC TCGCCGGCTG GCGCCAGGCC AGCCTGGCCG CGCTCGACCA GGTCGATGAG CTGTTCACGC GCGCCGGCAA CCTCCAGCTG CTGCGCGTGC ACGGCGACTG CCACGCCGGC AACGTGCTGT GGACCGACGC CGGCCCGCAC TTCGTCGACC TCGACGATGC CGTGACGGGC CCGGCCGTGC AGGACCTGTG GATGCTGCTC GGCGGCGAAC GCCACGAGAT GCAGACCCAG CTCGGCGCGC TGCTCGACGG CTATGAAACG CTGCGCGAAT TCGACCGCCG CGAGCTCGGC CTGATCGAGG CGCTGCGCAC GCTGCGCATC ATCAACCACA GCGCCTGGAT CGCCCGGCGC TGGCGCGACC CGGCGTTCCC GATCGCCTTT CCGTCGTTCG AGAGCCCGTC GTACTGGGCC CAGCAGACCA CCGTGCTGCA CGAGCAGATT GGCGCGATGC AAGGCCCCGC GCTGGTGGCC TGA
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Protein sequence | MNDIAPDDLP PAYRLPAPQQ ATDEQPYAGL TPYAVLDALD AAGLRGDGRI LQLNSYENRV FQVHLEDERV VVAKFYRAAR WSDAQILEEH QFALELAAAE VPAVPPLVLA AGLGIEPAPR LLGTPPTLAD WQGWRYAASP RCGGRAPELD DPAVLEWIGR FLARLHLVGQ ARPFEHRLRL DGSRIARAAV AWLCDQDLLP PDALAGWRQA SLAALDQVDE LFTRAGNLQL LRVHGDCHAG NVLWTDAGPH FVDLDDAVTG PAVQDLWMLL GGERHEMQTQ LGALLDGYET LREFDRRELG LIEALRTLRI INHSAWIARR WRDPAFPIAF PSFESPSYWA QQTTVLHEQI GAMQGPALVA
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