| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0540 |
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| Symbol | |
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| ID | 6161334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 588092 |
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| End bp | 588661 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663289 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789580 |
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| Protein GI | 171057231 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTGC CTCAACCTGC ACCTCGTTTC GACCGCGCTG AATACTTCGG CTGGGAAGAA
CAGCAAGCGG ACAAGCACGA GTTCATCGCC GGCGAGGTCT TCGCGATGGT CGGTGCACGA
CAGGAGCACG TGCTGGTGGC GGGCGCGCTG TTCGCCCGCT TTCGCGAGCA CCTGCGCGGC
ACGCGTTGCC GGGCCTACAC CTCCGACATG AAGCTGGAAG TCGAGGCGGC CGATGCGGTG
TTCTATCCCG ACGTGATGGT CAGCTGCGAC GAGGACGACC GTCAGCGCGC GATGGCGCTG
CGCGCGCCGC TGCTGATCGT GGAGGTGCTG TCGGACTCGA CCGCCGCATT CGACCGCGGC
GCCAAGTTCG CCGCCTACCG CCGGCTGGCG TCGCTGCAGG AGTACCTGCT GGTGGACGTG
GAGGCGCGGC GGCTCGAACT GTTCCGCCGC GAGCCGGTGG GCTGGGTGCT GCACGAGCCC
GAGGGCGAGG GTGATGCGGC CACGCTGCGC CTGGCCGGCA TCGGCCTCGA CCTGACCGCG
CTCGACGCGT TCGGCGACCT GCAGGCATGA
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| Protein sequence | MGLPQPAPRF DRAEYFGWEE QQADKHEFIA GEVFAMVGAR QEHVLVAGAL FARFREHLRG
TRCRAYTSDM KLEVEAADAV FYPDVMVSCD EDDRQRAMAL RAPLLIVEVL SDSTAAFDRG
AKFAAYRRLA SLQEYLLVDV EARRLELFRR EPVGWVLHEP EGEGDAATLR LAGIGLDLTA
LDAFGDLQA
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