| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0501 |
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| Symbol | |
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| ID | 6162128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 542802 |
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| End bp | 544841 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663250 |
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| Product | penicillin-binding protein 2 |
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| Protein accession | YP_001789541 |
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| Protein GI | 171057192 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0109803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGC TGCGCAATGT CGAACAGGAG CTGGAGCGCT ACCGCACCCG CCTGATCGTG
GCCGCGGTCT TCGTGCTGGC CTGCTTCGGG CTGCTGGCCG CCCGGCTGGT GTACCTGCAG
GTGGTGGTCC ACGAAGACCT CGCCACCCGG GCCGAGAACA ACCGCATCGC GGTGGTGCCG
ATCGTGCCCA ACCGCGGCCT GATCGTCGAC CGCAACGGCG TCGTGCTGGC CGACAACTAC
TCGGCCTACA CGCTCGAGAT CACGCGCTCG CAGCTCACCG AGTCGCTCGA ATCGACGATC
GACCAGCTCG CCGAGGTGGT CGAGATCCAG CCGCGCGACC GACGCCGCTT CAAGCGCCTG
CTCGAGGACT CGCGCAGCTT CGAATCGCTG CCGATCCGCA CCAAGCTCAG CGACGCCGAG
GTGGCCCGCT TCACGGCCCA GCGCTACCGT TTTCCGGGCG TCGAGATCAA GGCGCGGCTG
TTCCGCAACT ACCCCTATGG CGAACTCGCC AGCCACCTGC TCGGCTACAT CGGCCGCATC
AACCGCAACG AGCTGGCCGC GATGGAGGAG TGGCCGGAGG AAGACTGGGC CAACTACCGC
GGCACCGAGG TGATCGGCAA GCTCGGCATC GAGCAGAAAT ACGAGCGCGA GCTGCACGGC
ACCACCGGCG TCGAGGAGGT CGAGACCAGC GCCGGCGGGC GGCCGGTGCG GCGCCTGCGC
TCCGAGCCGG CCTCGCCGGG CAGCAGCGTG CACCTGAGCA TCGACATCAA GCTGCAGGCC
CTGATCGAGC GTCTGTTCGG CGAGCGTCGC GGCGCGCTGG TGGCGATCGA CCCGCGCAAC
GGCGAGGTGC TGGCCTTCGT CAGCAAGCCG ACCTTCGACC CCAACCTGTT CGTCGACGGC
ATCGACCACG AGAGCTGGAA GGAGCTCAAC GAATCGATCG ACAAGCCGCT GCTCAACCGC
GCGCTCAAGG GCACCTACCC GCCGGGCTCG ACCTACAAGC CGTTCATGGC GATGGCCGCG
CTGACCACCG GCAAGCGCAG CGCCACCCAG GTGATCAACG ACAACGGCTC GTTCATGTTC
GGCAACCACC GCTTCCGCAG CCACGGCGAC GGCGGGCTGG GGTCGGTCGA CATGGTCAAG
TCGATCGTGC TGTCGAGCAA CGTCTACTAC TACTCGCTGG CCAACGAGAT GGGTGTCGAC
CTGATCCACG ACCAGCTCTA CCCCTACGGC TTCGGCCGGC GCACCGGCAT CGATCTCGAC
GGCGAGAGCA CCGGCGACCT GCCCTCGACC GCCTGGAAAC GCAGCAAGTA CAAGCGCCCC
GACCTGCAGC GCTGGTACGC CGGCGAGACC ATCTCGCTGG GCATCGGCCA GGGCTACAAC
AACTTCACCA TGCTGCAGAT GGCCAGCGCG ATGGCCACGC TGGTGTCGGG CGGCAAGCGC
TTCGAGCCGC GGCTGGTGCG CGAGATCGAG GACGTGCTGA CCCACGACCG CCAACGTCCG
AGCGCCCAGG CCCTCGAGCC GCTCGACCTC AAGCCCGAGC ACGTCGCGGT GATCCGCCGC
GCCATGCACG GCGTGACGCA GGAGGGCACC TCGACGCGGG TGTTCGCCGG CGCCGCCTAC
CCGAGCGGCG GCAAGACCGG CACCGCCCAG GCCAAGAGCA TCGGCCAGAA GGAAAAGTAC
AACGCCGCCA AGCTGGCCGA ATACTTCCGC GACCACTCGC TCTACACCGC CTTCGCGCCG
GTCGACGAGC CGCGCGTGGC CCTGGCGGTG GTGGTCGAGA ACTCCGGCTT CGGCGCCGAG
GCGGCCGCGC CGATCGCACG CCGCGTGCTC GACTACCTGC TGCTCGGTCT CTATCCCAGC
GAGGAGGACA TCGCGCTCGC CCGGCTGGGC AAGGCCGGTG CACCGGTCGG CCCGCAGCGG
CTGGCCGCCG ACGTGCCGCT GCCGACCCTG ATGAGCGCGG GCATGGCGAC GCCGACCGAT
GCCGCCGCGT CCGCACCCGC ACCGGCCAGT GCGCCGATTC TTCTCGGCGG CCCCCGATGA
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| Protein sequence | MIELRNVEQE LERYRTRLIV AAVFVLACFG LLAARLVYLQ VVVHEDLATR AENNRIAVVP
IVPNRGLIVD RNGVVLADNY SAYTLEITRS QLTESLESTI DQLAEVVEIQ PRDRRRFKRL
LEDSRSFESL PIRTKLSDAE VARFTAQRYR FPGVEIKARL FRNYPYGELA SHLLGYIGRI
NRNELAAMEE WPEEDWANYR GTEVIGKLGI EQKYERELHG TTGVEEVETS AGGRPVRRLR
SEPASPGSSV HLSIDIKLQA LIERLFGERR GALVAIDPRN GEVLAFVSKP TFDPNLFVDG
IDHESWKELN ESIDKPLLNR ALKGTYPPGS TYKPFMAMAA LTTGKRSATQ VINDNGSFMF
GNHRFRSHGD GGLGSVDMVK SIVLSSNVYY YSLANEMGVD LIHDQLYPYG FGRRTGIDLD
GESTGDLPST AWKRSKYKRP DLQRWYAGET ISLGIGQGYN NFTMLQMASA MATLVSGGKR
FEPRLVREIE DVLTHDRQRP SAQALEPLDL KPEHVAVIRR AMHGVTQEGT STRVFAGAAY
PSGGKTGTAQ AKSIGQKEKY NAAKLAEYFR DHSLYTAFAP VDEPRVALAV VVENSGFGAE
AAAPIARRVL DYLLLGLYPS EEDIALARLG KAGAPVGPQR LAADVPLPTL MSAGMATPTD
AAASAPAPAS APILLGGPR
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