| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0483 |
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| Symbol | groEL |
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| ID | 6162089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 520586 |
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| End bp | 522235 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641663232 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001789523 |
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| Protein GI | 171057174 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAA AAGACGTGAT CTTTGGCGGC GAGGCACGTG CCCGCATGGT CGAAGGCGTG
AACATCCTGG CCAACGCGGT CAAGGTCACC CTGGGCCCCA AGGGTCGCAA CGTGGTGCTC
GAGCGCTCGT TCGGCGCCCC GACCGTGACC AAGGACGGTG TGTCCGTGGC CAAGGAAATC
GAGCTCAAGG ACAAGCTGCA GAACATGGGC GCGCAGATGG TCAAGGAAGT TGCTTCCAAG
ACCAGCGACA ACGCCGGTGA CGGCACCACC ACCGCCACCG TGCTGGCCCA GGCCATCGTG
CGCGAAGGCA TGAAGTACGT GGCCGCCGGC ATGAACCCGA TGGATCTGAA GCGCGGCATC
GACAAGGCGG TGCACGCCCT GGTCGCCGAG CTGAAGAAGG CTTCGAAGGC CACCACGACG
TCGAAGGAAA TCGCCCAGGT TGGCTCGATC TCGGCCAACA GCGACGAATC GATCGGCACC
ATCATCGCCA ACGCGATGGA CAAGGTCGGC AAGGAAGGCG TCATCACCGT CGAAGACGGC
AAGTCGCTGG ACAACGAGCT CGACGTCGTC GAAGGCATGC AGTTCGACCG CGGCTACCTG
TCGCCGTACT TCATCAACAA CCCCGAGAAG CAAGCCGCGC TGCTGGACAA CCCGTTCGTC
CTGCTGTTCG ACAAGAAGAT CTCGAACATC CGCGACCTGC TGCCCACGCT GGAGCAGGTG
GCCAAGGCCG GCCGTCCGCT GCTGATCATT GCTGAAGAAG TCGACGGCGA AGCGCTGGCG
ACCCTGGTGG TCAACACCAT CCGCGGCATC CTGAAGGTCG TGGCCGTCAA GGCGCCTGGC
TTCGGCGACC GCCGCAAGGC CATGCTCGAA GACATCGCCA TCCTGACCGG CGGCAAGGTC
ATCGCCGAAG AAGTCGGCCT GACGCTCGAG AAGGTCACGC TGGCCGATCT GGGCCAGGCC
AAGCGCGTCG AAGTGGGCAA GGAAAACACC ACCATCATCG ACGGCGCCGG TGCCGCTGGC
GACATCGAAG CCCGCGTCAA GCAGATCCGC ATCCAGATCG AAGAAGCCAC CAGCGACTAC
GACCGTGAAA AGCTGCAAGA GCGCGTGGCC AAGCTGGCCG GCGGTGTTGC ACTGATCAAG
GTCGGCGCGG CCACCGAAGT CGAGATGAAG GAAAAGAAGG CCCGTGTCGA AGACGCCCTG
CACGCAACCC GCGCAGCCGT CGAAGAAGGC ATCGTGGCTG GCGGCGGCGT GGCTCTGCTG
CGTGCCAAGC AGGCTGCTGG CGAGATCAAG GGCGACAACG CCGACCAGGA CGCCGGCATC
AAGCTGGTCC TGAAGGCGAT CGAAGCCCCG CTGCGCGAAA TCGTCTACAA CGCCGGCGGC
GAAGCCTCCG TCGTCGTGAA CGCCGTGCTG GCCGGTTCGG GCAACTACGG CTTCAACGCC
GCCAACGACA CCTATGGCGA CATGATCGAA ATGGGCATCC TGGACCCGAC CAAGGTGACC
CGCACCGCGC TGCAGAACGC CGCGTCGGTC GCATCGCTGA TGCTGACCAC CGAGTGCATG
GTTGCCGAGG CTCCGAAGGA TGAAGCCGCC GGCGGCGGCA TGCCCGGCGG CATGGGTGGC
ATGGGCGGCA TGGGCGGCAT GGACATGTGA
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| Protein sequence | MAAKDVIFGG EARARMVEGV NILANAVKVT LGPKGRNVVL ERSFGAPTVT KDGVSVAKEI
ELKDKLQNMG AQMVKEVASK TSDNAGDGTT TATVLAQAIV REGMKYVAAG MNPMDLKRGI
DKAVHALVAE LKKASKATTT SKEIAQVGSI SANSDESIGT IIANAMDKVG KEGVITVEDG
KSLDNELDVV EGMQFDRGYL SPYFINNPEK QAALLDNPFV LLFDKKISNI RDLLPTLEQV
AKAGRPLLII AEEVDGEALA TLVVNTIRGI LKVVAVKAPG FGDRRKAMLE DIAILTGGKV
IAEEVGLTLE KVTLADLGQA KRVEVGKENT TIIDGAGAAG DIEARVKQIR IQIEEATSDY
DREKLQERVA KLAGGVALIK VGAATEVEMK EKKARVEDAL HATRAAVEEG IVAGGGVALL
RAKQAAGEIK GDNADQDAGI KLVLKAIEAP LREIVYNAGG EASVVVNAVL AGSGNYGFNA
ANDTYGDMIE MGILDPTKVT RTALQNAASV ASLMLTTECM VAEAPKDEAA GGGMPGGMGG
MGGMGGMDM
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