| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0479 |
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| Symbol | |
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| ID | 6162097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 515745 |
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| End bp | 518408 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663228 |
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| Product | leucyl-tRNA synthetase |
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| Protein accession | YP_001789519 |
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| Protein GI | 171057170 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0495] Leucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA AGTACGATCC CGCCGCCATC GAATCCGCCG CCCATGCGCA GTGGGTCGCG
GCCGATGCCT ACCGCGTCGA CGAAAACGCC CGCGACAGCC AGGGCCAGCT CAAGCCCAAG
TTCTACGCCT GCTCGATGCT GCCGTACCCC AGCGGCAAGC TGCACATGGG CCACGTGCGC
AACTACACCA TCAACGACAT GCTCACGCGC CAGCTGCGCA TGAAGGGCAT GAACGTGCTG
ATGCCGATGG GCTGGGATGC CTTCGGCCTG CCGGCCGAAA ACGCCGCGCT CAAGAACAGC
GTGCCGCCCG AAAAATGGAC GCGCGAGAAC ATCGCCACCA TGAAGGGCCA GATGCTGGCG
ATGGGCCTGG CGATCGACTG GAGCCGCGAG GTCGCCACCT GCGACCCGAC CTACTACAAA
TGGAACCAGT GGCTGTTCCT GAAGATGCTC GAAGCCGGCA TCGCCGAGCG CCGCACCCAG
GTCGTCAACT GGGACCCGGT CGACCAGACC GTGCTGGCCA ACGAGCAGGT CATCGACGGC
CGCGGCTGGC GTTCGGGCGC GCTGGTCGAG AAGCGTGAGA TCCCGGGCTA CTACCTCAAC
ATCGTCAAGT ACGCCGATGA GTTGCTCGGC GCGGTGGCCA ATCCGGAAGA TCCGAACTAC
CTGTCGGGTT GGCCCGAGCG CGTGCGCCTG ATGCAGGAGA ACTGGATCGG CAAGAGCGAG
GGCGTGCGTT TCGCCTTCCC GCACCAGATC GCGGGCGCCG ACGGTGAGCT GATCCAGGGC
GGCAAGCTCT ACGTCTTCAC GACCCGCGCC GACACCATCA TGGGCGTGAC CTTCTGCGCC
GTGGCGCCGG AGCATCCGCT GGCTGCACAC GCCGCGGCGA CGAACCCGGC GCTGGCCGCG
TTCATCGCCG AATGTGCGCA TGGCGGCACC ACCGAAGCCG AACTCGCCAC GCAGGAGAAG
AAGGGCCTGC CCACGGGCCT GTTCGTGACG CACCCGCTGA CGGGCGCGCA GGTCGAGGTC
TGGGTCGGCA ACTACGTGCT GATGAGCTAC GGCGACGGTG CCGTGATGGG CGTGCCGGCG
CACGACGAGC GCGATTTCGC GTTCGCCAAG AAATACGGCA TCTCGATCCG GCAGGTCGTG
CAGGCCGAAG GCCAGACCTT CAGCCTCGAC GGCTGGGCCG ACTGGTACGG CGACAAGCAG
CGCGCGGTGT GCGTCAACTC GGGTCTGCTC GACGGACTGC CGTACAAGGA GGCCGTTTCC
AAGGTCGCCG AACTCGTCGG CGCTCAGGGC CTGGGCGAGA AGAAAACCAC CTGGCGCCTG
CGCGACTGGG GCATCAGCCG CCAGCGTTAC TGGGGCACGC CGATCCCGAT CATCCATTGC
GACGATTGCG GCTCGGTGCC GGTGCCCGAG AAGGATCTGC CGGTCGTGCT GCCGATCGAC
TGCGTGCCCG ATGGCAGCGG CAATCCGCTC AAGAAGCGCA CCGACTTCCT GAACGTCGCC
TGCCCCTGCT GCGGCAAGCC CGCGCAGCGC GAGACCGACA CGATGGACAC CTTCGTGGAC
AGCTCGTGGT ACTTCATGCG CTATTGCGAC GCCCGCAACA GCGAACAGAT GGTCGCCGGC
GGCACCGACT ACTGGATGCC GATGGACCAG TACATCGGCG GCATCGAACA CGCGATCCTG
CACCTGCTGT ACGCGCGCTT CTGGACCAAG GTGATGCGCG ACCTGGGTCT GGTGAAGGTC
AACGAACCCT TCACCAAGCT GCTCACGCAA GGCATGGTGC TCAACCACAT CTACTCGCGC
CGCACCGACA AGGGTGGCAT CGAGTACTTC TGGCCGCACG AGGTCGAGAA CGTGTTCGAC
GCCGGCGGCA AGGTCACCGG CGCCAAGCTC AAGAGCGACG GCTCGGCGGT GGATTACGGC
GGCATCGGCA CGATGTCGAA GTCCAAGAAC AACGGCGTCG ATCCGCAGGA CCTGATCAAC
CAGTACGGCG CCGACACGGC CCGGCTGTTC GTGATGTTCG CGTCGCCGCC CGAGCAGACG
CTGGAGTGGA ACGACGCCGG CGTCGAAGGC GCGCACCGTT TCCTCAAGCG CGTGTGGGGC
TTCGGCGTCA AGCAGGCCGA GTTGCTGAAG GGCGCGACCG AGGTCGGCGC CGAGCTGTCG
GGTGATGCCA AGGCGCTGCG CCGCGAGGTG CATCTGGTGC TCAGGCAGGT CAGCTACGAC
TACGAGCGCA TGCAGTACAA CACGGTGGTC AGCGGCTCGA TGAAGCTGCT CAACGCGCTC
GAGGCCTACA AGCACGACGG CAGCGCCGGC AGCGCGGCCG TGTTGCGCGA AGGTTATTCG
GTGCTGCTGC GCGGCCTGTA TCCGGCCTGC CCGCACATCA CGCATCACCT GTGGTCCGAA
CTCGGTTATG CCGCCAAGCT GGGCGACCTG CTCGACGCGC CGTGGCCCGA GGTCGTCGAA
GCCGCGCTGG TGCAGGACGA GATCGAGCTG GTGCTGCAGG TCAACGGCAA GACGCGCGGT
TCGATCAAGG TGCCCGCCGC AGCCGACAAG GCCGCGATCG AGGCGGCCGC TGCGGCCAGC
GCCGAGGTTG CCAAGTTCGC CGACGGCAAG CCGATCAGGA AGTTGATCGT GGTGCCGGGC
CGCCTCGTCA ACGTGGTGGT GTGA
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| Protein sequence | MNEKYDPAAI ESAAHAQWVA ADAYRVDENA RDSQGQLKPK FYACSMLPYP SGKLHMGHVR
NYTINDMLTR QLRMKGMNVL MPMGWDAFGL PAENAALKNS VPPEKWTREN IATMKGQMLA
MGLAIDWSRE VATCDPTYYK WNQWLFLKML EAGIAERRTQ VVNWDPVDQT VLANEQVIDG
RGWRSGALVE KREIPGYYLN IVKYADELLG AVANPEDPNY LSGWPERVRL MQENWIGKSE
GVRFAFPHQI AGADGELIQG GKLYVFTTRA DTIMGVTFCA VAPEHPLAAH AAATNPALAA
FIAECAHGGT TEAELATQEK KGLPTGLFVT HPLTGAQVEV WVGNYVLMSY GDGAVMGVPA
HDERDFAFAK KYGISIRQVV QAEGQTFSLD GWADWYGDKQ RAVCVNSGLL DGLPYKEAVS
KVAELVGAQG LGEKKTTWRL RDWGISRQRY WGTPIPIIHC DDCGSVPVPE KDLPVVLPID
CVPDGSGNPL KKRTDFLNVA CPCCGKPAQR ETDTMDTFVD SSWYFMRYCD ARNSEQMVAG
GTDYWMPMDQ YIGGIEHAIL HLLYARFWTK VMRDLGLVKV NEPFTKLLTQ GMVLNHIYSR
RTDKGGIEYF WPHEVENVFD AGGKVTGAKL KSDGSAVDYG GIGTMSKSKN NGVDPQDLIN
QYGADTARLF VMFASPPEQT LEWNDAGVEG AHRFLKRVWG FGVKQAELLK GATEVGAELS
GDAKALRREV HLVLRQVSYD YERMQYNTVV SGSMKLLNAL EAYKHDGSAG SAAVLREGYS
VLLRGLYPAC PHITHHLWSE LGYAAKLGDL LDAPWPEVVE AALVQDEIEL VLQVNGKTRG
SIKVPAAADK AAIEAAAAAS AEVAKFADGK PIRKLIVVPG RLVNVVV
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