| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0474 |
|---|
| Symbol | |
|---|
| ID | 6162947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 512621 |
|---|
| End bp | 513052 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641663223 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_001789514 |
|---|
| Protein GI | 171057165 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACG CGGATGAACT CAAGAGCTCG GGCCTGAAGG CCACTTTGCC GCGCATCAAG
ATCCTTGAGA TCTTCCAGCG CGCCCAAGAG CGCCACATGA CGGCCGAGGA CGTGTTCAAG
CTGCTGCTGG CCGACGGCTC GGACATCGGC CTGGCCACGG TCTACCGCGT GCTGATGCAG
TTCGAGCAGG CCGGCATCCT GTCGCGCAAC CACTTCGAGA GCGGCAAGTC GATCTTCGAA
CTCAACGAGG GCCAGCACCA CGATCACCTC GTGTGCATGG ACTGCAGCCG GGTCGAGGAG
TTCTTCGACC CGCAGATCGA ACTGCGCCAG CGCGAGATCG CCACCGAACG CGGTTTCAGG
CTGCAGGAGC ATTCGCTGGC GCTCTACGCC CACTGCACCA AGGACGCCTG CCCGCACCGT
CACTCGAAGT GA
|
|---|
| Protein sequence | MTNADELKSS GLKATLPRIK ILEIFQRAQE RHMTAEDVFK LLLADGSDIG LATVYRVLMQ
FEQAGILSRN HFESGKSIFE LNEGQHHDHL VCMDCSRVEE FFDPQIELRQ REIATERGFR
LQEHSLALYA HCTKDACPHR HSK
|
|---|
| |