| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0421 |
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| Symbol | |
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| ID | 6163658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 462586 |
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| End bp | 463482 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663170 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_001789461 |
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| Protein GI | 171057112 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTCG AACGCCTGCA CCCGCACACC AAGGACATCG GCGGCGGTTT CGTCGTGCGG
CGCGCGCTGC CGGCGGCGCA GCGCCAAGCG GTCGGGCCGT TCCTGTTCCT CGACCACTTC
GGCCCGCTGC ACGTCGGGCC GGACGACAAC CACGACGTGC GCCCGCACCC GCACATCGGC
CTGGCGACGG TGACGTATCT GTTCGAGGGC GTGCTGCAGC ACCGGGATTC GCTCGGCGTG
TCGCAGCGCA TCGAGCCCGG CGCGATCAAC TGGATGACCG CCGGGCGCGG CATCGTGCAC
TCCGAGCGCC GCCCCGACGA TCTGCGCGGG CGCGGCTACA CCCAGCACGG CCTGCAGCTG
TGGGTGGCGC TGCCCGAGGC GGATGAAGAA ACCGAGCCGC AGTTCGAGCA CACGCCCGCC
GCACGCATCC CGTCGCTCGA ACGCTGCGAC GCCCGCGTGC GGGTGCTGGT CGGCAGCGCG
CACGGCCTGA GCTCGCCGGT GTCGACCCGC TCGCCCACGC TGTTCCTCGA TCACGCCCTC
GATGCCCGCG CCGAGTGCGC CCTGCCGGCG CCGACGGCCG GCATCGAACG CGCGCTCTAC
GGCGTCGACG CGCCGTTCGA GCTGGTGATG GGCGACGGCA CGGTCGAGTC GTTCGAGCCG
CACACGCTGG TCGTGCTGCC CGACGACCGG GTCGCCACCT TGCGTGCCGG GGCCGAAGCG
GCGCGGGTGG CGCTGGTCGG CGGCGCGCCG CTCGGACACC GCCACATGGC GTGGAACTTC
GTGTCGACGC GCCGTGAGCG CATCGCCGCC GCCGCCGAGG CCTGGGAGCA CGACGCCCTC
GGCCAGGTGC CCGGCGAAAC CGAACGCATC CCCCTGCCGC CTAACCTGCG ACGCTGA
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| Protein sequence | MPLERLHPHT KDIGGGFVVR RALPAAQRQA VGPFLFLDHF GPLHVGPDDN HDVRPHPHIG
LATVTYLFEG VLQHRDSLGV SQRIEPGAIN WMTAGRGIVH SERRPDDLRG RGYTQHGLQL
WVALPEADEE TEPQFEHTPA ARIPSLERCD ARVRVLVGSA HGLSSPVSTR SPTLFLDHAL
DARAECALPA PTAGIERALY GVDAPFELVM GDGTVESFEP HTLVVLPDDR VATLRAGAEA
ARVALVGGAP LGHRHMAWNF VSTRRERIAA AAEAWEHDAL GQVPGETERI PLPPNLRR
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