Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0420 |
Symbol | |
ID | 6163657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 462037 |
End bp | 462513 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641663169 |
Product | signal-transduction protein |
Protein accession | YP_001789460 |
Protein GI | 171057111 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTTC CATTCCAACT GTCCGACGAG CCCATCATGA CCAGCGTAGC CGACATCCTC AAGAGCAAAC CCCAGGCCGT GGTGCACACC ACCACGCCGT CGACCACCGT GTTCGATGCC GTCAAGCTGA TGGCAGAAAA AGGCATCGGC GCCCTGCTGG TGACCGAAGG CGAGCAGCTG GTCGGCATCG TCACCGAGCG CGACTACGCG CGCAAGGTGG CGCTGATGTC GCGATCGTCG AGAGAGACGC CGGTGCGCGA CATCATGACC GCCGACGTGA TGTTCGTGCG GCCCGACCAG ACCAGCTCCG AATGCATGGC GCTGATGACC GAAAACCGCC TGCGCCACCT GCCCGTGATG GCCGACGGCA AGCTGCTCGG CCTGATCTCG ATCGGCGACC TGGTCAAGGA CATCATCTCG GAGCAGCGCT TCATCATCGA GCAGCTCGAG CACTACATCA CCGGCGAACG CGCCTGA
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Protein sequence | MIFPFQLSDE PIMTSVADIL KSKPQAVVHT TTPSTTVFDA VKLMAEKGIG ALLVTEGEQL VGIVTERDYA RKVALMSRSS RETPVRDIMT ADVMFVRPDQ TSSECMALMT ENRLRHLPVM ADGKLLGLIS IGDLVKDIIS EQRFIIEQLE HYITGERA
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