Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0400 |
Symbol | |
ID | 6161689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 439096 |
End bp | 439764 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641663149 |
Product | lipoate-protein ligase B |
Protein accession | YP_001789440 |
Protein GI | 171057091 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.255142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCC GCAACCTGGC CCGCGTGCCT TACGAGCCCA CCTACGACGC GATGCGCGCC TTCACCGCCG CGCGCACGCC CGACAGCGCC GACGAACTCT GGCTGTGCGA GCACGATCCC GTCTACACCC AGGGCATCGC CGGCAAGGCC GAGCATGTGC TCGCGCCCGA CGGCGTGCCG GTGGTCGCCA CCAACCGCGG CGGCCAGGTC ACGTACCACG GGCCGGGGCA GGTGGTGGCC TACCCGCTGG TCGATCTCAA GCGGCTGGGC ATCTATGTCA AGGAGTACGT CTACCGGGTC GAAGAGGCCG TGATCCGCAC GCTCGCCACC TGGCACGTCA CCGGCCACCG CGTGAGCGGC GCGCCGGGTA TCTACGTGCG GCTCGACGAC CCGTTCGATC ACCGCGCGCT GACCGGCCCG CACGATCCGC GCGACCCGTT CCGCGGCCTG GGCAAGGTGT CGGCGCTGGG CATCAAGATC GCCAACCACT GCACTTACCA CGGCGTGGCG CTGAACGTGG CGATGGATCT CTCGCCCTAT GCGCGCATCA ACCCTTGCGG TTATGCAGGG CTGCAAACAG TCGATCTGGC TACACTCGGC GTCGCCGCCG AATGGCCCGA CGCAGCGCAG CGCCTGGGTG ATCGGCTCGC CGCGCTGCTC GCGCCCTGA
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Protein sequence | MLIRNLARVP YEPTYDAMRA FTAARTPDSA DELWLCEHDP VYTQGIAGKA EHVLAPDGVP VVATNRGGQV TYHGPGQVVA YPLVDLKRLG IYVKEYVYRV EEAVIRTLAT WHVTGHRVSG APGIYVRLDD PFDHRALTGP HDPRDPFRGL GKVSALGIKI ANHCTYHGVA LNVAMDLSPY ARINPCGYAG LQTVDLATLG VAAEWPDAAQ RLGDRLAALL AP
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